Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Upk3bl1Q9D701 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upk3bl1Q9D701 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upk3bl1Q9D701 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upk3bl1Q9D701 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upk3bl1Q9D701 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Upk3bl1Q9D701 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.62■■□□□ 1.05
Upk3bl1Q9D701 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Upk3bl1Q9D701 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Upk3bl1Q9D701 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upk3bl1Q9D701 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upk3bl1Q9D701 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upk3bl1Q9D701 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Upk3bl1Q9D701 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upk3bl1Q9D701 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Upk3bl1Q9D701 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upk3bl1Q9D701 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Upk3bl1Q9D701 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upk3bl1Q9D701 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upk3bl1Q9D701 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upk3bl1Q9D701 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upk3bl1Q9D701 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.58■■□□□ 1.05
Upk3bl1Q9D701 Gm25262-201ENSMUST00000174934 133 ntBASIC21.58■■□□□ 1.05
Upk3bl1Q9D701 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upk3bl1Q9D701 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upk3bl1Q9D701 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Upk3bl1Q9D701 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.56■■□□□ 1.04
Upk3bl1Q9D701 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upk3bl1Q9D701 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upk3bl1Q9D701 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Upk3bl1Q9D701 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Upk3bl1Q9D701 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Upk3bl1Q9D701 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upk3bl1Q9D701 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Upk3bl1Q9D701 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Upk3bl1Q9D701 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Upk3bl1Q9D701 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Upk3bl1Q9D701 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Upk3bl1Q9D701 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upk3bl1Q9D701 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Upk3bl1Q9D701 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Upk3bl1Q9D701 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Upk3bl1Q9D701 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upk3bl1Q9D701 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upk3bl1Q9D701 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Upk3bl1Q9D701 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Upk3bl1Q9D701 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Upk3bl1Q9D701 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Upk3bl1Q9D701 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Upk3bl1Q9D701 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Upk3bl1Q9D701 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upk3bl1Q9D701 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Upk3bl1Q9D701 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Upk3bl1Q9D701 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Upk3bl1Q9D701 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Upk3bl1Q9D701 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upk3bl1Q9D701 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upk3bl1Q9D701 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upk3bl1Q9D701 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Upk3bl1Q9D701 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Upk3bl1Q9D701 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Upk3bl1Q9D701 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upk3bl1Q9D701 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Upk3bl1Q9D701 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Upk3bl1Q9D701 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Upk3bl1Q9D701 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Upk3bl1Q9D701 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.43■■□□□ 1.02
Upk3bl1Q9D701 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Upk3bl1Q9D701 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Upk3bl1Q9D701 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Upk3bl1Q9D701 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Upk3bl1Q9D701 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upk3bl1Q9D701 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upk3bl1Q9D701 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upk3bl1Q9D701 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.42■■□□□ 1.02
Upk3bl1Q9D701 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upk3bl1Q9D701 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Upk3bl1Q9D701 Gm27322-201ENSMUST00000184007 104 ntBASIC21.41■■□□□ 1.02
Upk3bl1Q9D701 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upk3bl1Q9D701 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upk3bl1Q9D701 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Upk3bl1Q9D701 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Upk3bl1Q9D701 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upk3bl1Q9D701 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Upk3bl1Q9D701 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Upk3bl1Q9D701 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Upk3bl1Q9D701 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upk3bl1Q9D701 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.39■■□□□ 1.01
Upk3bl1Q9D701 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upk3bl1Q9D701 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms