Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Smtnl1Q99LM3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Smtnl1Q99LM3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.1■■□□□ 1.77
Smtnl1Q99LM3 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.1■■□□□ 1.77
Smtnl1Q99LM3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Smtnl1Q99LM3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smtnl1Q99LM3 Gm9397-201ENSMUST00000200125 605 ntBASIC26.09■■□□□ 1.77
Smtnl1Q99LM3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Smtnl1Q99LM3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Smtnl1Q99LM3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.08■■□□□ 1.77
Smtnl1Q99LM3 Gm24970-201ENSMUST00000175582 82 ntBASIC26.08■■□□□ 1.77
Smtnl1Q99LM3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.08■■□□□ 1.77
Smtnl1Q99LM3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
Smtnl1Q99LM3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smtnl1Q99LM3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Smtnl1Q99LM3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
Smtnl1Q99LM3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Smtnl1Q99LM3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.05■■□□□ 1.76
Smtnl1Q99LM3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Smtnl1Q99LM3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Smtnl1Q99LM3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Smtnl1Q99LM3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Smtnl1Q99LM3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Smtnl1Q99LM3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Smtnl1Q99LM3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Smtnl1Q99LM3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Smtnl1Q99LM3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Smtnl1Q99LM3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smtnl1Q99LM3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.02■■□□□ 1.76
Smtnl1Q99LM3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
Smtnl1Q99LM3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.01■■□□□ 1.75
Smtnl1Q99LM3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.01■■□□□ 1.75
Smtnl1Q99LM3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.01■■□□□ 1.75
Smtnl1Q99LM3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Smtnl1Q99LM3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smtnl1Q99LM3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26■■□□□ 1.75
Smtnl1Q99LM3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Smtnl1Q99LM3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Smtnl1Q99LM3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26■■□□□ 1.75
Smtnl1Q99LM3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.99■■□□□ 1.75
Smtnl1Q99LM3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smtnl1Q99LM3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Smtnl1Q99LM3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Smtnl1Q99LM3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smtnl1Q99LM3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Smtnl1Q99LM3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.98■■□□□ 1.75
Smtnl1Q99LM3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Smtnl1Q99LM3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.97■■□□□ 1.75
Smtnl1Q99LM3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Smtnl1Q99LM3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Smtnl1Q99LM3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Smtnl1Q99LM3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.95■■□□□ 1.75
Smtnl1Q99LM3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Smtnl1Q99LM3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
Smtnl1Q99LM3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smtnl1Q99LM3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smtnl1Q99LM3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Smtnl1Q99LM3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smtnl1Q99LM3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Smtnl1Q99LM3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Smtnl1Q99LM3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.93■■□□□ 1.74
Smtnl1Q99LM3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.93■■□□□ 1.74
Smtnl1Q99LM3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Smtnl1Q99LM3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Smtnl1Q99LM3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Smtnl1Q99LM3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Smtnl1Q99LM3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.91■■□□□ 1.74
Smtnl1Q99LM3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smtnl1Q99LM3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Smtnl1Q99LM3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Smtnl1Q99LM3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Smtnl1Q99LM3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Smtnl1Q99LM3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Smtnl1Q99LM3 Gm45855-201ENSMUST00000212546 880 ntBASIC25.88■■□□□ 1.73
Smtnl1Q99LM3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smtnl1Q99LM3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Smtnl1Q99LM3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Smtnl1Q99LM3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Smtnl1Q99LM3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.87■■□□□ 1.73
Smtnl1Q99LM3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.86■■□□□ 1.73
Smtnl1Q99LM3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Smtnl1Q99LM3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Smtnl1Q99LM3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Smtnl1Q99LM3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Smtnl1Q99LM3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Smtnl1Q99LM3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smtnl1Q99LM3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Smtnl1Q99LM3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Smtnl1Q99LM3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.8■■□□□ 1.72
Smtnl1Q99LM3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Smtnl1Q99LM3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
Smtnl1Q99LM3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.79■■□□□ 1.72
Smtnl1Q99LM3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Smtnl1Q99LM3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.77■■□□□ 1.72
Smtnl1Q99LM3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.76■■□□□ 1.71
Smtnl1Q99LM3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Smtnl1Q99LM3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Smtnl1Q99LM3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Smtnl1Q99LM3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.75■■□□□ 1.71
Smtnl1Q99LM3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms