Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdha3Q91Y16 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdha3Q91Y16 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdha3Q91Y16 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdha3Q91Y16 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdha3Q91Y16 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdha3Q91Y16 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Pcdha3Q91Y16 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.05■■□□□ 1.6
Pcdha3Q91Y16 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdha3Q91Y16 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdha3Q91Y16 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdha3Q91Y16 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdha3Q91Y16 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdha3Q91Y16 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Pcdha3Q91Y16 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Pcdha3Q91Y16 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdha3Q91Y16 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.01■■□□□ 1.59
Pcdha3Q91Y16 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdha3Q91Y16 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.01■■□□□ 1.59
Pcdha3Q91Y16 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdha3Q91Y16 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdha3Q91Y16 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdha3Q91Y16 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdha3Q91Y16 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdha3Q91Y16 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Pcdha3Q91Y16 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Pcdha3Q91Y16 Gm6821-201ENSMUST00000107540 542 ntBASIC24.95■■□□□ 1.58
Pcdha3Q91Y16 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Pcdha3Q91Y16 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdha3Q91Y16 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdha3Q91Y16 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdha3Q91Y16 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Pcdha3Q91Y16 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Pcdha3Q91Y16 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Pcdha3Q91Y16 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdha3Q91Y16 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdha3Q91Y16 Gm8503-201ENSMUST00000118131 455 ntBASIC24.92■■□□□ 1.58
Pcdha3Q91Y16 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdha3Q91Y16 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdha3Q91Y16 Nkain2-201ENSMUST00000092602 558 ntBASIC24.91■■□□□ 1.58
Pcdha3Q91Y16 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdha3Q91Y16 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdha3Q91Y16 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.9■■□□□ 1.58
Pcdha3Q91Y16 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdha3Q91Y16 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdha3Q91Y16 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdha3Q91Y16 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.89■■□□□ 1.58
Pcdha3Q91Y16 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Pcdha3Q91Y16 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdha3Q91Y16 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Pcdha3Q91Y16 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
Pcdha3Q91Y16 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdha3Q91Y16 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdha3Q91Y16 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdha3Q91Y16 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdha3Q91Y16 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdha3Q91Y16 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Pcdha3Q91Y16 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Pcdha3Q91Y16 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.82■■□□□ 1.56
Pcdha3Q91Y16 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.81■■□□□ 1.56
Pcdha3Q91Y16 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdha3Q91Y16 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdha3Q91Y16 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.8■■□□□ 1.56
Pcdha3Q91Y16 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdha3Q91Y16 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Pcdha3Q91Y16 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.79■■□□□ 1.56
Pcdha3Q91Y16 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdha3Q91Y16 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdha3Q91Y16 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.79■■□□□ 1.56
Pcdha3Q91Y16 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdha3Q91Y16 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.78■■□□□ 1.56
Pcdha3Q91Y16 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdha3Q91Y16 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Pcdha3Q91Y16 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdha3Q91Y16 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdha3Q91Y16 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdha3Q91Y16 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Pcdha3Q91Y16 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdha3Q91Y16 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdha3Q91Y16 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.75■■□□□ 1.55
Pcdha3Q91Y16 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Pcdha3Q91Y16 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdha3Q91Y16 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdha3Q91Y16 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdha3Q91Y16 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
Pcdha3Q91Y16 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Pcdha3Q91Y16 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Pcdha3Q91Y16 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.7■■□□□ 1.55
Pcdha3Q91Y16 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdha3Q91Y16 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.7■■□□□ 1.54
Pcdha3Q91Y16 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Pcdha3Q91Y16 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdha3Q91Y16 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms