Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdha9Q91Y11 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha9Q91Y11 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha9Q91Y11 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
Pcdha9Q91Y11 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdha9Q91Y11 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdha9Q91Y11 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Pcdha9Q91Y11 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdha9Q91Y11 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.64■■□□□ 1.7
Pcdha9Q91Y11 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.64■■□□□ 1.7
Pcdha9Q91Y11 Nkain2-201ENSMUST00000092602 558 ntBASIC25.64■■□□□ 1.7
Pcdha9Q91Y11 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdha9Q91Y11 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.63■■□□□ 1.69
Pcdha9Q91Y11 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Pcdha9Q91Y11 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.62■■□□□ 1.69
Pcdha9Q91Y11 Gm30023-201ENSMUST00000197970 889 ntBASIC25.61■■□□□ 1.69
Pcdha9Q91Y11 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Pcdha9Q91Y11 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdha9Q91Y11 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdha9Q91Y11 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.6■■□□□ 1.69
Pcdha9Q91Y11 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdha9Q91Y11 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdha9Q91Y11 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdha9Q91Y11 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdha9Q91Y11 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdha9Q91Y11 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
Pcdha9Q91Y11 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdha9Q91Y11 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Pcdha9Q91Y11 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdha9Q91Y11 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdha9Q91Y11 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdha9Q91Y11 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.55■■□□□ 1.68
Pcdha9Q91Y11 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdha9Q91Y11 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdha9Q91Y11 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdha9Q91Y11 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdha9Q91Y11 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
Pcdha9Q91Y11 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdha9Q91Y11 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Pcdha9Q91Y11 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdha9Q91Y11 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Pcdha9Q91Y11 Gm6821-201ENSMUST00000107540 542 ntBASIC25.5■■□□□ 1.67
Pcdha9Q91Y11 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdha9Q91Y11 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdha9Q91Y11 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdha9Q91Y11 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdha9Q91Y11 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdha9Q91Y11 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdha9Q91Y11 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdha9Q91Y11 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdha9Q91Y11 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdha9Q91Y11 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdha9Q91Y11 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdha9Q91Y11 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Pcdha9Q91Y11 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdha9Q91Y11 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Pcdha9Q91Y11 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.45■■□□□ 1.66
Pcdha9Q91Y11 Gm8503-201ENSMUST00000118131 455 ntBASIC25.45■■□□□ 1.66
Pcdha9Q91Y11 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdha9Q91Y11 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Pcdha9Q91Y11 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdha9Q91Y11 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdha9Q91Y11 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.43■■□□□ 1.66
Pcdha9Q91Y11 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Pcdha9Q91Y11 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.41■■□□□ 1.66
Pcdha9Q91Y11 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdha9Q91Y11 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdha9Q91Y11 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.4■■□□□ 1.66
Pcdha9Q91Y11 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.39■■□□□ 1.66
Pcdha9Q91Y11 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.39■■□□□ 1.66
Pcdha9Q91Y11 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdha9Q91Y11 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.39■■□□□ 1.66
Pcdha9Q91Y11 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.38■■□□□ 1.65
Pcdha9Q91Y11 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.38■■□□□ 1.65
Pcdha9Q91Y11 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.37■■□□□ 1.65
Pcdha9Q91Y11 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.36■■□□□ 1.65
Pcdha9Q91Y11 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdha9Q91Y11 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdha9Q91Y11 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdha9Q91Y11 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdha9Q91Y11 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.35■■□□□ 1.65
Pcdha9Q91Y11 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.35■■□□□ 1.65
Pcdha9Q91Y11 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdha9Q91Y11 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdha9Q91Y11 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdha9Q91Y11 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdha9Q91Y11 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdha9Q91Y11 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdha9Q91Y11 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdha9Q91Y11 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdha9Q91Y11 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdha9Q91Y11 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.3■■□□□ 1.64
Pcdha9Q91Y11 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdha9Q91Y11 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Pcdha9Q91Y11 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdha9Q91Y11 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdha9Q91Y11 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdha9Q91Y11 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdha9Q91Y11 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Pcdha9Q91Y11 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms