Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhga11Q91XY8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.95■■□□□ 1.26
Pcdhga11Q91XY8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Pcdhga11Q91XY8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhga11Q91XY8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.92■■□□□ 1.26
Pcdhga11Q91XY8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhga11Q91XY8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhga11Q91XY8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhga11Q91XY8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Pcdhga11Q91XY8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga11Q91XY8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.83■■□□□ 1.25
Pcdhga11Q91XY8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga11Q91XY8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga11Q91XY8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga11Q91XY8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhga11Q91XY8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhga11Q91XY8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhga11Q91XY8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhga11Q91XY8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga11Q91XY8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga11Q91XY8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Pcdhga11Q91XY8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Pcdhga11Q91XY8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhga11Q91XY8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga11Q91XY8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga11Q91XY8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga11Q91XY8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga11Q91XY8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga11Q91XY8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Pcdhga11Q91XY8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Pcdhga11Q91XY8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhga11Q91XY8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.68■■□□□ 1.22
Pcdhga11Q91XY8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga11Q91XY8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.67■■□□□ 1.22
Pcdhga11Q91XY8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga11Q91XY8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga11Q91XY8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhga11Q91XY8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhga11Q91XY8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
Pcdhga11Q91XY8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhga11Q91XY8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga11Q91XY8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhga11Q91XY8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms