Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhga11Q91XY8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.95■■□□□ 1.26
Pcdhga11Q91XY8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Pcdhga11Q91XY8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhga11Q91XY8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhga11Q91XY8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.92■■□□□ 1.26
Pcdhga11Q91XY8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhga11Q91XY8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhga11Q91XY8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhga11Q91XY8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhga11Q91XY8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.87■■□□□ 1.25
Pcdhga11Q91XY8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga11Q91XY8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga11Q91XY8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga11Q91XY8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Pcdhga11Q91XY8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga11Q91XY8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.83■■□□□ 1.25
Pcdhga11Q91XY8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga11Q91XY8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga11Q91XY8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga11Q91XY8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga11Q91XY8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhga11Q91XY8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhga11Q91XY8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhga11Q91XY8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhga11Q91XY8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga11Q91XY8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga11Q91XY8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Pcdhga11Q91XY8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Pcdhga11Q91XY8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhga11Q91XY8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga11Q91XY8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga11Q91XY8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga11Q91XY8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga11Q91XY8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga11Q91XY8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga11Q91XY8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga11Q91XY8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Pcdhga11Q91XY8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Pcdhga11Q91XY8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhga11Q91XY8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga11Q91XY8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.68■■□□□ 1.22
Pcdhga11Q91XY8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga11Q91XY8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.67■■□□□ 1.22
Pcdhga11Q91XY8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga11Q91XY8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga11Q91XY8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhga11Q91XY8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga11Q91XY8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhga11Q91XY8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
Pcdhga11Q91XY8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhga11Q91XY8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga11Q91XY8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhga11Q91XY8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga11Q91XY8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms