Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc3Q91XX1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Pcdhgc3Q91XX1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc3Q91XX1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc3Q91XX1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.42■■□□□ 1.18
Pcdhgc3Q91XX1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc3Q91XX1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc3Q91XX1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhgc3Q91XX1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc3Q91XX1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc3Q91XX1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc3Q91XX1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc3Q91XX1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc3Q91XX1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc3Q91XX1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc3Q91XX1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc3Q91XX1 Gm24804-201ENSMUST00000174982 85 ntBASIC22.39■■□□□ 1.17
Pcdhgc3Q91XX1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgc3Q91XX1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Pcdhgc3Q91XX1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc3Q91XX1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhgc3Q91XX1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc3Q91XX1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc3Q91XX1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc3Q91XX1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.38■■□□□ 1.17
Pcdhgc3Q91XX1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc3Q91XX1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc3Q91XX1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Pcdhgc3Q91XX1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc3Q91XX1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc3Q91XX1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc3Q91XX1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc3Q91XX1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc3Q91XX1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc3Q91XX1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhgc3Q91XX1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgc3Q91XX1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgc3Q91XX1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgc3Q91XX1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgc3Q91XX1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgc3Q91XX1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhgc3Q91XX1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgc3Q91XX1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgc3Q91XX1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pcdhgc3Q91XX1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgc3Q91XX1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgc3Q91XX1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgc3Q91XX1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgc3Q91XX1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhgc3Q91XX1 Peli2-204ENSMUST00000226513 1320 ntBASIC22.29■■□□□ 1.16
Pcdhgc3Q91XX1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Pcdhgc3Q91XX1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgc3Q91XX1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgc3Q91XX1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgc3Q91XX1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgc3Q91XX1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgc3Q91XX1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhgc3Q91XX1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgc3Q91XX1 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.26■■□□□ 1.15
Pcdhgc3Q91XX1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgc3Q91XX1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgc3Q91XX1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhgc3Q91XX1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhgc3Q91XX1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc3Q91XX1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhgc3Q91XX1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pcdhgc3Q91XX1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pcdhgc3Q91XX1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc3Q91XX1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc3Q91XX1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhgc3Q91XX1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc3Q91XX1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc3Q91XX1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgc3Q91XX1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgc3Q91XX1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgc3Q91XX1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhgc3Q91XX1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhgc3Q91XX1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
Pcdhgc3Q91XX1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc3Q91XX1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc3Q91XX1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Pcdhgc3Q91XX1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc3Q91XX1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgc3Q91XX1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhgc3Q91XX1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhgc3Q91XX1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc3Q91XX1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc3Q91XX1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc3Q91XX1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc3Q91XX1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc3Q91XX1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc3Q91XX1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhgc3Q91XX1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc3Q91XX1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc3Q91XX1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc3Q91XX1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc3Q91XX1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc3Q91XX1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc3Q91XX1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc3Q91XX1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms