Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Ddx41Q91VN6 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.38■■□□□ 1.97
Ddx41Q91VN6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Ddx41Q91VN6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ddx41Q91VN6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx41Q91VN6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx41Q91VN6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ddx41Q91VN6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ddx41Q91VN6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ddx41Q91VN6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Ddx41Q91VN6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx41Q91VN6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx41Q91VN6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx41Q91VN6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.34■■□□□ 1.97
Ddx41Q91VN6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx41Q91VN6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ddx41Q91VN6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.32■■□□□ 1.96
Ddx41Q91VN6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
Ddx41Q91VN6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Ddx41Q91VN6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx41Q91VN6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx41Q91VN6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx41Q91VN6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx41Q91VN6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Ddx41Q91VN6 Gm7432-201ENSMUST00000210343 879 ntBASIC27.29■■□□□ 1.96
Ddx41Q91VN6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.29■■□□□ 1.96
Ddx41Q91VN6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.27■■□□□ 1.96
Ddx41Q91VN6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx41Q91VN6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx41Q91VN6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx41Q91VN6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx41Q91VN6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx41Q91VN6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx41Q91VN6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.24■■□□□ 1.95
Ddx41Q91VN6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.23■■□□□ 1.95
Ddx41Q91VN6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Ddx41Q91VN6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx41Q91VN6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
Ddx41Q91VN6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx41Q91VN6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx41Q91VN6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx41Q91VN6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Ddx41Q91VN6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Ddx41Q91VN6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx41Q91VN6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.15■■□□□ 1.94
Ddx41Q91VN6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.15■■□□□ 1.94
Ddx41Q91VN6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.15■■□□□ 1.94
Ddx41Q91VN6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx41Q91VN6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Ddx41Q91VN6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Ddx41Q91VN6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx41Q91VN6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx41Q91VN6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx41Q91VN6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx41Q91VN6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.12■■□□□ 1.93
Ddx41Q91VN6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx41Q91VN6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx41Q91VN6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.11■■□□□ 1.93
Ddx41Q91VN6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx41Q91VN6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx41Q91VN6 Gm11599-201ENSMUST00000118720 878 ntBASIC27.1■■□□□ 1.93
Ddx41Q91VN6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.1■■□□□ 1.93
Ddx41Q91VN6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.1■■□□□ 1.93
Ddx41Q91VN6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.09■■□□□ 1.93
Ddx41Q91VN6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.09■■□□□ 1.93
Ddx41Q91VN6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.08■■□□□ 1.93
Ddx41Q91VN6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx41Q91VN6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx41Q91VN6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx41Q91VN6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx41Q91VN6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx41Q91VN6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx41Q91VN6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx41Q91VN6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx41Q91VN6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.05■■□□□ 1.92
Ddx41Q91VN6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Ddx41Q91VN6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx41Q91VN6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Ddx41Q91VN6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.04■■□□□ 1.92
Ddx41Q91VN6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx41Q91VN6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx41Q91VN6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.04■■□□□ 1.92
Ddx41Q91VN6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ddx41Q91VN6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.03■■□□□ 1.92
Ddx41Q91VN6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Ddx41Q91VN6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.03■■□□□ 1.92
Ddx41Q91VN6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ddx41Q91VN6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx41Q91VN6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx41Q91VN6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.01■■□□□ 1.92
Ddx41Q91VN6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx41Q91VN6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx41Q91VN6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms