Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb17Q91VD8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.9■■□□□ 1.58
Pcdhb17Q91VD8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Pcdhb17Q91VD8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.89■■□□□ 1.58
Pcdhb17Q91VD8 Gm8503-201ENSMUST00000118131 455 ntBASIC24.88■■□□□ 1.57
Pcdhb17Q91VD8 Gm30023-201ENSMUST00000197970 889 ntBASIC24.88■■□□□ 1.57
Pcdhb17Q91VD8 Gm6821-201ENSMUST00000107540 542 ntBASIC24.87■■□□□ 1.57
Pcdhb17Q91VD8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhb17Q91VD8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhb17Q91VD8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Pcdhb17Q91VD8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb17Q91VD8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb17Q91VD8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhb17Q91VD8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb17Q91VD8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.83■■□□□ 1.57
Pcdhb17Q91VD8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
Pcdhb17Q91VD8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb17Q91VD8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb17Q91VD8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb17Q91VD8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb17Q91VD8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb17Q91VD8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb17Q91VD8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb17Q91VD8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb17Q91VD8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb17Q91VD8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb17Q91VD8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb17Q91VD8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb17Q91VD8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb17Q91VD8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb17Q91VD8 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.78■■□□□ 1.56
Pcdhb17Q91VD8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb17Q91VD8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb17Q91VD8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.78■■□□□ 1.56
Pcdhb17Q91VD8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.78■■□□□ 1.56
Pcdhb17Q91VD8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb17Q91VD8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.77■■□□□ 1.56
Pcdhb17Q91VD8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb17Q91VD8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb17Q91VD8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb17Q91VD8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb17Q91VD8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Pcdhb17Q91VD8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb17Q91VD8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb17Q91VD8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb17Q91VD8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdhb17Q91VD8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb17Q91VD8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhb17Q91VD8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Pcdhb17Q91VD8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.72■■□□□ 1.55
Pcdhb17Q91VD8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Pcdhb17Q91VD8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
Pcdhb17Q91VD8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb17Q91VD8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb17Q91VD8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb17Q91VD8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb17Q91VD8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb17Q91VD8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb17Q91VD8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb17Q91VD8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb17Q91VD8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.7■■□□□ 1.54
Pcdhb17Q91VD8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.68■■□□□ 1.54
Pcdhb17Q91VD8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb17Q91VD8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb17Q91VD8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb17Q91VD8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb17Q91VD8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.66■■□□□ 1.54
Pcdhb17Q91VD8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.66■■□□□ 1.54
Pcdhb17Q91VD8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb17Q91VD8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb17Q91VD8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.65■■□□□ 1.54
Pcdhb17Q91VD8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb17Q91VD8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb17Q91VD8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcdhb17Q91VD8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
Pcdhb17Q91VD8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb17Q91VD8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.62■■□□□ 1.53
Pcdhb17Q91VD8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb17Q91VD8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhb17Q91VD8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb17Q91VD8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.6■■□□□ 1.53
Pcdhb17Q91VD8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.59■■□□□ 1.53
Pcdhb17Q91VD8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Pcdhb17Q91VD8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb17Q91VD8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhb17Q91VD8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb17Q91VD8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb17Q91VD8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Pcdhb17Q91VD8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.54■■□□□ 1.52
Pcdhb17Q91VD8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Pcdhb17Q91VD8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb17Q91VD8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb17Q91VD8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb17Q91VD8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb17Q91VD8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb17Q91VD8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb17Q91VD8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb17Q91VD8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb17Q91VD8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb17Q91VD8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms