Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb11Q91UZ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb11Q91UZ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.57■■□□□ 1.52
Pcdhb11Q91UZ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb11Q91UZ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb11Q91UZ8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb11Q91UZ8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.56■■□□□ 1.52
Pcdhb11Q91UZ8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb11Q91UZ8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb11Q91UZ8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb11Q91UZ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb11Q91UZ8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb11Q91UZ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.54■■□□□ 1.52
Pcdhb11Q91UZ8 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.53■■□□□ 1.52
Pcdhb11Q91UZ8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.53■■□□□ 1.52
Pcdhb11Q91UZ8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.52■■□□□ 1.52
Pcdhb11Q91UZ8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb11Q91UZ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Pcdhb11Q91UZ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
Pcdhb11Q91UZ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.51■■□□□ 1.51
Pcdhb11Q91UZ8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdhb11Q91UZ8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Pcdhb11Q91UZ8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Pcdhb11Q91UZ8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb11Q91UZ8 Gm30023-201ENSMUST00000197970 889 ntBASIC24.49■■□□□ 1.51
Pcdhb11Q91UZ8 Nkain2-201ENSMUST00000092602 558 ntBASIC24.49■■□□□ 1.51
Pcdhb11Q91UZ8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb11Q91UZ8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb11Q91UZ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb11Q91UZ8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb11Q91UZ8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
Pcdhb11Q91UZ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Pcdhb11Q91UZ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.46■■□□□ 1.51
Pcdhb11Q91UZ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb11Q91UZ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb11Q91UZ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb11Q91UZ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.44■■□□□ 1.5
Pcdhb11Q91UZ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Pcdhb11Q91UZ8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb11Q91UZ8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb11Q91UZ8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb11Q91UZ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb11Q91UZ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb11Q91UZ8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb11Q91UZ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb11Q91UZ8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb11Q91UZ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
Pcdhb11Q91UZ8 Gm6821-201ENSMUST00000107540 542 ntBASIC24.39■■□□□ 1.49
Pcdhb11Q91UZ8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb11Q91UZ8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb11Q91UZ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb11Q91UZ8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb11Q91UZ8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb11Q91UZ8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb11Q91UZ8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb11Q91UZ8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb11Q91UZ8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb11Q91UZ8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Pcdhb11Q91UZ8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb11Q91UZ8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb11Q91UZ8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
Pcdhb11Q91UZ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Pcdhb11Q91UZ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb11Q91UZ8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb11Q91UZ8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Pcdhb11Q91UZ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb11Q91UZ8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb11Q91UZ8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.34■■□□□ 1.49
Pcdhb11Q91UZ8 Gm8503-201ENSMUST00000118131 455 ntBASIC24.34■■□□□ 1.49
Pcdhb11Q91UZ8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb11Q91UZ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb11Q91UZ8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb11Q91UZ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.33■■□□□ 1.49
Pcdhb11Q91UZ8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.33■■□□□ 1.48
Pcdhb11Q91UZ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb11Q91UZ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb11Q91UZ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Pcdhb11Q91UZ8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb11Q91UZ8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb11Q91UZ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.3■■□□□ 1.48
Pcdhb11Q91UZ8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb11Q91UZ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb11Q91UZ8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb11Q91UZ8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb11Q91UZ8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.28■■□□□ 1.48
Pcdhb11Q91UZ8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb11Q91UZ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.27■■□□□ 1.48
Pcdhb11Q91UZ8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.27■■□□□ 1.48
Pcdhb11Q91UZ8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Pcdhb11Q91UZ8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.25■■□□□ 1.47
Pcdhb11Q91UZ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb11Q91UZ8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.25■■□□□ 1.47
Pcdhb11Q91UZ8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb11Q91UZ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb11Q91UZ8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb11Q91UZ8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb11Q91UZ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb11Q91UZ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.23■■□□□ 1.47
Pcdhb11Q91UZ8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.22■■□□□ 1.47
Pcdhb11Q91UZ8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms