Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Sgms1Q8VCQ6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sgms1Q8VCQ6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sgms1Q8VCQ6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Sgms1Q8VCQ6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Sgms1Q8VCQ6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sgms1Q8VCQ6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sgms1Q8VCQ6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sgms1Q8VCQ6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sgms1Q8VCQ6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sgms1Q8VCQ6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.03■■□□□ 1.76
Sgms1Q8VCQ6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Sgms1Q8VCQ6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sgms1Q8VCQ6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sgms1Q8VCQ6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
Sgms1Q8VCQ6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Sgms1Q8VCQ6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sgms1Q8VCQ6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26■■□□□ 1.75
Sgms1Q8VCQ6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sgms1Q8VCQ6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26■■□□□ 1.75
Sgms1Q8VCQ6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26■■□□□ 1.75
Sgms1Q8VCQ6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26■■□□□ 1.75
Sgms1Q8VCQ6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sgms1Q8VCQ6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sgms1Q8VCQ6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sgms1Q8VCQ6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Sgms1Q8VCQ6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Sgms1Q8VCQ6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sgms1Q8VCQ6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sgms1Q8VCQ6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sgms1Q8VCQ6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Sgms1Q8VCQ6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.97■■□□□ 1.75
Sgms1Q8VCQ6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Sgms1Q8VCQ6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Sgms1Q8VCQ6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.95■■□□□ 1.74
Sgms1Q8VCQ6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sgms1Q8VCQ6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Sgms1Q8VCQ6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sgms1Q8VCQ6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Sgms1Q8VCQ6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sgms1Q8VCQ6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.93■■□□□ 1.74
Sgms1Q8VCQ6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sgms1Q8VCQ6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sgms1Q8VCQ6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Sgms1Q8VCQ6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sgms1Q8VCQ6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Sgms1Q8VCQ6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sgms1Q8VCQ6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
Sgms1Q8VCQ6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Sgms1Q8VCQ6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.87■■□□□ 1.73
Sgms1Q8VCQ6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sgms1Q8VCQ6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sgms1Q8VCQ6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.86■■□□□ 1.73
Sgms1Q8VCQ6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sgms1Q8VCQ6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sgms1Q8VCQ6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sgms1Q8VCQ6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Sgms1Q8VCQ6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.85■■□□□ 1.73
Sgms1Q8VCQ6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sgms1Q8VCQ6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sgms1Q8VCQ6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sgms1Q8VCQ6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Sgms1Q8VCQ6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.83■■□□□ 1.73
Sgms1Q8VCQ6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Sgms1Q8VCQ6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.82■■□□□ 1.72
Sgms1Q8VCQ6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sgms1Q8VCQ6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Sgms1Q8VCQ6 Gm30023-201ENSMUST00000197970 889 ntBASIC25.81■■□□□ 1.72
Sgms1Q8VCQ6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sgms1Q8VCQ6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sgms1Q8VCQ6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Sgms1Q8VCQ6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Sgms1Q8VCQ6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Sgms1Q8VCQ6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Sgms1Q8VCQ6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Sgms1Q8VCQ6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sgms1Q8VCQ6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
Sgms1Q8VCQ6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sgms1Q8VCQ6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sgms1Q8VCQ6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Sgms1Q8VCQ6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Sgms1Q8VCQ6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sgms1Q8VCQ6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Sgms1Q8VCQ6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sgms1Q8VCQ6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.76■■□□□ 1.71
Sgms1Q8VCQ6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sgms1Q8VCQ6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.76■■□□□ 1.71
Sgms1Q8VCQ6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.75■■□□□ 1.71
Sgms1Q8VCQ6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sgms1Q8VCQ6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Sgms1Q8VCQ6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sgms1Q8VCQ6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Sgms1Q8VCQ6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.74■■□□□ 1.71
Sgms1Q8VCQ6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sgms1Q8VCQ6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Sgms1Q8VCQ6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sgms1Q8VCQ6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sgms1Q8VCQ6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sgms1Q8VCQ6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sgms1Q8VCQ6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.72■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms