Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Rnf8Q8VC56 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf8Q8VC56 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf8Q8VC56 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf8Q8VC56 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf8Q8VC56 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf8Q8VC56 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.76■■□□□ 1.23
Rnf8Q8VC56 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf8Q8VC56 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf8Q8VC56 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.75■■□□□ 1.23
Rnf8Q8VC56 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf8Q8VC56 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf8Q8VC56 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf8Q8VC56 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf8Q8VC56 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf8Q8VC56 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Rnf8Q8VC56 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.73■■□□□ 1.23
Rnf8Q8VC56 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf8Q8VC56 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf8Q8VC56 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf8Q8VC56 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.72■■□□□ 1.23
Rnf8Q8VC56 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf8Q8VC56 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf8Q8VC56 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.71■■□□□ 1.23
Rnf8Q8VC56 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rnf8Q8VC56 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf8Q8VC56 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf8Q8VC56 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf8Q8VC56 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf8Q8VC56 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf8Q8VC56 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rnf8Q8VC56 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf8Q8VC56 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf8Q8VC56 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf8Q8VC56 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf8Q8VC56 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rnf8Q8VC56 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf8Q8VC56 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.65■■□□□ 1.22
Rnf8Q8VC56 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf8Q8VC56 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf8Q8VC56 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf8Q8VC56 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf8Q8VC56 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Rnf8Q8VC56 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf8Q8VC56 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf8Q8VC56 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf8Q8VC56 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.62■■□□□ 1.21
Rnf8Q8VC56 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf8Q8VC56 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf8Q8VC56 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf8Q8VC56 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf8Q8VC56 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Rnf8Q8VC56 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf8Q8VC56 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf8Q8VC56 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf8Q8VC56 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf8Q8VC56 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Rnf8Q8VC56 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf8Q8VC56 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf8Q8VC56 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf8Q8VC56 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf8Q8VC56 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
Rnf8Q8VC56 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rnf8Q8VC56 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf8Q8VC56 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf8Q8VC56 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf8Q8VC56 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Rnf8Q8VC56 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
Rnf8Q8VC56 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf8Q8VC56 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf8Q8VC56 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rnf8Q8VC56 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf8Q8VC56 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf8Q8VC56 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rnf8Q8VC56 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf8Q8VC56 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
Rnf8Q8VC56 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.54■■□□□ 1.2
Rnf8Q8VC56 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf8Q8VC56 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Rnf8Q8VC56 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf8Q8VC56 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf8Q8VC56 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf8Q8VC56 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf8Q8VC56 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf8Q8VC56 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.52■■□□□ 1.2
Rnf8Q8VC56 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.52■■□□□ 1.19
Rnf8Q8VC56 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf8Q8VC56 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf8Q8VC56 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.5■■□□□ 1.19
Rnf8Q8VC56 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf8Q8VC56 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Rnf8Q8VC56 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rnf8Q8VC56 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf8Q8VC56 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.49■■□□□ 1.19
Rnf8Q8VC56 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.49■■□□□ 1.19
Rnf8Q8VC56 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.49■■□□□ 1.19
Rnf8Q8VC56 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf8Q8VC56 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf8Q8VC56 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Rnf8Q8VC56 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms