Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.63■■□□□ 1.53
Sh3kbp1Q8R550 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3kbp1Q8R550 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Sh3kbp1Q8R550 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3kbp1Q8R550 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3kbp1Q8R550 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3kbp1Q8R550 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3kbp1Q8R550 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.6■■□□□ 1.53
Sh3kbp1Q8R550 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3kbp1Q8R550 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3kbp1Q8R550 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.6■■□□□ 1.53
Sh3kbp1Q8R550 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3kbp1Q8R550 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3kbp1Q8R550 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.59■■□□□ 1.53
Sh3kbp1Q8R550 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3kbp1Q8R550 Amer2-203ENSMUST00000225247 2662 ntBASIC24.59■■□□□ 1.53
Sh3kbp1Q8R550 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sh3kbp1Q8R550 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.58■■□□□ 1.53
Sh3kbp1Q8R550 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sh3kbp1Q8R550 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Sh3kbp1Q8R550 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3kbp1Q8R550 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sh3kbp1Q8R550 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Sh3kbp1Q8R550 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.55■■□□□ 1.52
Sh3kbp1Q8R550 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Sh3kbp1Q8R550 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3kbp1Q8R550 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3kbp1Q8R550 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sh3kbp1Q8R550 Gm7432-201ENSMUST00000210343 879 ntBASIC24.54■■□□□ 1.52
Sh3kbp1Q8R550 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Sh3kbp1Q8R550 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3kbp1Q8R550 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3kbp1Q8R550 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3kbp1Q8R550 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3kbp1Q8R550 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3kbp1Q8R550 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3kbp1Q8R550 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Sh3kbp1Q8R550 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
Sh3kbp1Q8R550 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.47■■□□□ 1.51
Sh3kbp1Q8R550 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3kbp1Q8R550 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.47■■□□□ 1.51
Sh3kbp1Q8R550 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Sh3kbp1Q8R550 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.46■■□□□ 1.51
Sh3kbp1Q8R550 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3kbp1Q8R550 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3kbp1Q8R550 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3kbp1Q8R550 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3kbp1Q8R550 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3kbp1Q8R550 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3kbp1Q8R550 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3kbp1Q8R550 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Sh3kbp1Q8R550 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Sh3kbp1Q8R550 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Sh3kbp1Q8R550 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3kbp1Q8R550 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3kbp1Q8R550 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh3kbp1Q8R550 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.42■■□□□ 1.5
Sh3kbp1Q8R550 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.42■■□□□ 1.5
Sh3kbp1Q8R550 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.41■■□□□ 1.5
Sh3kbp1Q8R550 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3kbp1Q8R550 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sh3kbp1Q8R550 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Sh3kbp1Q8R550 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sh3kbp1Q8R550 Gm11599-201ENSMUST00000118720 878 ntBASIC24.38■■□□□ 1.49
Sh3kbp1Q8R550 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3kbp1Q8R550 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Sh3kbp1Q8R550 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sh3kbp1Q8R550 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Sh3kbp1Q8R550 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.36■■□□□ 1.49
Sh3kbp1Q8R550 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3kbp1Q8R550 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3kbp1Q8R550 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3kbp1Q8R550 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3kbp1Q8R550 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3kbp1Q8R550 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Sh3kbp1Q8R550 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.34■■□□□ 1.49
Sh3kbp1Q8R550 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.34■■□□□ 1.49
Sh3kbp1Q8R550 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.34■■□□□ 1.49
Sh3kbp1Q8R550 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Sh3kbp1Q8R550 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sh3kbp1Q8R550 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.33■■□□□ 1.48
Sh3kbp1Q8R550 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.32■■□□□ 1.48
Sh3kbp1Q8R550 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sh3kbp1Q8R550 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.31■■□□□ 1.48
Sh3kbp1Q8R550 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.3■■□□□ 1.48
Sh3kbp1Q8R550 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Sh3kbp1Q8R550 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sh3kbp1Q8R550 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3kbp1Q8R550 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3kbp1Q8R550 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
Sh3kbp1Q8R550 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3kbp1Q8R550 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3kbp1Q8R550 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Sh3kbp1Q8R550 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sh3kbp1Q8R550 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.25■■□□□ 1.47
Sh3kbp1Q8R550 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3kbp1Q8R550 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.24■■□□□ 1.47
Sh3kbp1Q8R550 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3kbp1Q8R550 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Sh3kbp1Q8R550 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms