Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gtf2a1lQ8R4I4 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.24■■□□□ 1.31
Gtf2a1lQ8R4I4 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.23■■□□□ 1.31
Gtf2a1lQ8R4I4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gtf2a1lQ8R4I4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Gtf2a1lQ8R4I4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Gtf2a1lQ8R4I4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gtf2a1lQ8R4I4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.19■■□□□ 1.3
Gtf2a1lQ8R4I4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gtf2a1lQ8R4I4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gtf2a1lQ8R4I4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Gtf2a1lQ8R4I4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Gtf2a1lQ8R4I4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gtf2a1lQ8R4I4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gtf2a1lQ8R4I4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Gtf2a1lQ8R4I4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gtf2a1lQ8R4I4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gtf2a1lQ8R4I4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gtf2a1lQ8R4I4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Gtf2a1lQ8R4I4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Gtf2a1lQ8R4I4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Gtf2a1lQ8R4I4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.13■■□□□ 1.29
Gtf2a1lQ8R4I4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gtf2a1lQ8R4I4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gtf2a1lQ8R4I4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Gtf2a1lQ8R4I4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Gtf2a1lQ8R4I4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gtf2a1lQ8R4I4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.11■■□□□ 1.29
Gtf2a1lQ8R4I4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Gtf2a1lQ8R4I4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gtf2a1lQ8R4I4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gtf2a1lQ8R4I4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gtf2a1lQ8R4I4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gtf2a1lQ8R4I4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.09■■□□□ 1.29
Gtf2a1lQ8R4I4 Gm6821-201ENSMUST00000107540 542 ntBASIC23.09■■□□□ 1.29
Gtf2a1lQ8R4I4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gtf2a1lQ8R4I4 Gm8503-201ENSMUST00000118131 455 ntBASIC23.08■■□□□ 1.29
Gtf2a1lQ8R4I4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gtf2a1lQ8R4I4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Gtf2a1lQ8R4I4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gtf2a1lQ8R4I4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gtf2a1lQ8R4I4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gtf2a1lQ8R4I4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gtf2a1lQ8R4I4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gtf2a1lQ8R4I4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Gtf2a1lQ8R4I4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Gtf2a1lQ8R4I4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Gtf2a1lQ8R4I4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gtf2a1lQ8R4I4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gtf2a1lQ8R4I4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Gtf2a1lQ8R4I4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gtf2a1lQ8R4I4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gtf2a1lQ8R4I4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Gtf2a1lQ8R4I4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Gtf2a1lQ8R4I4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.01■■□□□ 1.27
Gtf2a1lQ8R4I4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gtf2a1lQ8R4I4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gtf2a1lQ8R4I4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gtf2a1lQ8R4I4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gtf2a1lQ8R4I4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23■■□□□ 1.27
Gtf2a1lQ8R4I4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gtf2a1lQ8R4I4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Gtf2a1lQ8R4I4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Gtf2a1lQ8R4I4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Gtf2a1lQ8R4I4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.98■■□□□ 1.27
Gtf2a1lQ8R4I4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gtf2a1lQ8R4I4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gtf2a1lQ8R4I4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gtf2a1lQ8R4I4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Gtf2a1lQ8R4I4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Gtf2a1lQ8R4I4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gtf2a1lQ8R4I4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Gtf2a1lQ8R4I4 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.95■■□□□ 1.26
Gtf2a1lQ8R4I4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Gtf2a1lQ8R4I4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gtf2a1lQ8R4I4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gtf2a1lQ8R4I4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gtf2a1lQ8R4I4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Gtf2a1lQ8R4I4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gtf2a1lQ8R4I4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.93■■□□□ 1.26
Gtf2a1lQ8R4I4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Gtf2a1lQ8R4I4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Gtf2a1lQ8R4I4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Gtf2a1lQ8R4I4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.92■■□□□ 1.26
Gtf2a1lQ8R4I4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gtf2a1lQ8R4I4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Gtf2a1lQ8R4I4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Gtf2a1lQ8R4I4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Gtf2a1lQ8R4I4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Gtf2a1lQ8R4I4 Nkain2-201ENSMUST00000092602 558 ntBASIC22.9■■□□□ 1.26
Gtf2a1lQ8R4I4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Gtf2a1lQ8R4I4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Gtf2a1lQ8R4I4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.89■■□□□ 1.25
Gtf2a1lQ8R4I4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gtf2a1lQ8R4I4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Gtf2a1lQ8R4I4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gtf2a1lQ8R4I4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gtf2a1lQ8R4I4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gtf2a1lQ8R4I4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gtf2a1lQ8R4I4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms