Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
H2afjQ8R1M2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afjQ8R1M2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
H2afjQ8R1M2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H2afjQ8R1M2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
H2afjQ8R1M2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
H2afjQ8R1M2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
H2afjQ8R1M2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
H2afjQ8R1M2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
H2afjQ8R1M2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
H2afjQ8R1M2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
H2afjQ8R1M2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
H2afjQ8R1M2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
H2afjQ8R1M2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
H2afjQ8R1M2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.95■■□□□ 1.1
H2afjQ8R1M2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afjQ8R1M2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afjQ8R1M2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2afjQ8R1M2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2afjQ8R1M2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.93■■□□□ 1.1
H2afjQ8R1M2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2afjQ8R1M2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2afjQ8R1M2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2afjQ8R1M2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afjQ8R1M2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afjQ8R1M2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afjQ8R1M2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.91■■□□□ 1.1
H2afjQ8R1M2 Zfp131-205ENSMUST00000223812 663 ntBASIC21.91■■□□□ 1.1
H2afjQ8R1M2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afjQ8R1M2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H2afjQ8R1M2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
H2afjQ8R1M2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
H2afjQ8R1M2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
H2afjQ8R1M2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
H2afjQ8R1M2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afjQ8R1M2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afjQ8R1M2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.88■■□□□ 1.09
H2afjQ8R1M2 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.88■■□□□ 1.09
H2afjQ8R1M2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2afjQ8R1M2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H2afjQ8R1M2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H2afjQ8R1M2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2afjQ8R1M2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
H2afjQ8R1M2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.87■■□□□ 1.09
H2afjQ8R1M2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2afjQ8R1M2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
H2afjQ8R1M2 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.85■■□□□ 1.09
H2afjQ8R1M2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
H2afjQ8R1M2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
H2afjQ8R1M2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
H2afjQ8R1M2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
H2afjQ8R1M2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
H2afjQ8R1M2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
H2afjQ8R1M2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
H2afjQ8R1M2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afjQ8R1M2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
H2afjQ8R1M2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
H2afjQ8R1M2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afjQ8R1M2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
H2afjQ8R1M2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
H2afjQ8R1M2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afjQ8R1M2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
H2afjQ8R1M2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afjQ8R1M2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
H2afjQ8R1M2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.79■■□□□ 1.08
H2afjQ8R1M2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
H2afjQ8R1M2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
H2afjQ8R1M2 Gm9397-201ENSMUST00000200125 605 ntBASIC21.77■■□□□ 1.08
H2afjQ8R1M2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.76■■□□□ 1.07
H2afjQ8R1M2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
H2afjQ8R1M2 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.76■■□□□ 1.07
H2afjQ8R1M2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
H2afjQ8R1M2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
H2afjQ8R1M2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afjQ8R1M2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.75■■□□□ 1.07
H2afjQ8R1M2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afjQ8R1M2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H2afjQ8R1M2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afjQ8R1M2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afjQ8R1M2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H2afjQ8R1M2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H2afjQ8R1M2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afjQ8R1M2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.73■■□□□ 1.07
H2afjQ8R1M2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afjQ8R1M2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afjQ8R1M2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
H2afjQ8R1M2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afjQ8R1M2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
H2afjQ8R1M2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.72■■□□□ 1.07
H2afjQ8R1M2 Gm24970-201ENSMUST00000175582 82 ntBASIC21.72■■□□□ 1.07
H2afjQ8R1M2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.72■■□□□ 1.07
H2afjQ8R1M2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afjQ8R1M2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms