Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rpp40Q8R1F9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.99■■□□□ 1.75
Rpp40Q8R1F9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpp40Q8R1F9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rpp40Q8R1F9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpp40Q8R1F9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.97■■□□□ 1.75
Rpp40Q8R1F9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpp40Q8R1F9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rpp40Q8R1F9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Rpp40Q8R1F9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Rpp40Q8R1F9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.95■■□□□ 1.74
Rpp40Q8R1F9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Rpp40Q8R1F9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpp40Q8R1F9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Rpp40Q8R1F9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rpp40Q8R1F9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Rpp40Q8R1F9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rpp40Q8R1F9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rpp40Q8R1F9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Rpp40Q8R1F9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rpp40Q8R1F9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.9■■□□□ 1.74
Rpp40Q8R1F9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpp40Q8R1F9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rpp40Q8R1F9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.89■■□□□ 1.74
Rpp40Q8R1F9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.89■■□□□ 1.74
Rpp40Q8R1F9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpp40Q8R1F9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rpp40Q8R1F9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpp40Q8R1F9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rpp40Q8R1F9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rpp40Q8R1F9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Rpp40Q8R1F9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.86■■□□□ 1.73
Rpp40Q8R1F9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.85■■□□□ 1.73
Rpp40Q8R1F9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Rpp40Q8R1F9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rpp40Q8R1F9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rpp40Q8R1F9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Rpp40Q8R1F9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.82■■□□□ 1.72
Rpp40Q8R1F9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.82■■□□□ 1.72
Rpp40Q8R1F9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpp40Q8R1F9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpp40Q8R1F9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rpp40Q8R1F9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rpp40Q8R1F9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rpp40Q8R1F9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.81■■□□□ 1.72
Rpp40Q8R1F9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rpp40Q8R1F9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rpp40Q8R1F9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Rpp40Q8R1F9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Rpp40Q8R1F9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Rpp40Q8R1F9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Rpp40Q8R1F9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.77■■□□□ 1.72
Rpp40Q8R1F9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rpp40Q8R1F9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rpp40Q8R1F9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Rpp40Q8R1F9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rpp40Q8R1F9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Rpp40Q8R1F9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rpp40Q8R1F9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rpp40Q8R1F9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rpp40Q8R1F9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rpp40Q8R1F9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rpp40Q8R1F9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rpp40Q8R1F9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpp40Q8R1F9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpp40Q8R1F9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rpp40Q8R1F9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.71■■□□□ 1.71
Rpp40Q8R1F9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.71■■□□□ 1.71
Rpp40Q8R1F9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpp40Q8R1F9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpp40Q8R1F9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rpp40Q8R1F9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rpp40Q8R1F9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rpp40Q8R1F9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rpp40Q8R1F9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rpp40Q8R1F9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rpp40Q8R1F9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Rpp40Q8R1F9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rpp40Q8R1F9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rpp40Q8R1F9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rpp40Q8R1F9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rpp40Q8R1F9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
Rpp40Q8R1F9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
Rpp40Q8R1F9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.64■■□□□ 1.7
Rpp40Q8R1F9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Rpp40Q8R1F9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.63■■□□□ 1.69
Rpp40Q8R1F9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rpp40Q8R1F9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rpp40Q8R1F9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.61■■□□□ 1.69
Rpp40Q8R1F9 Gm7432-201ENSMUST00000210343 879 ntBASIC25.61■■□□□ 1.69
Rpp40Q8R1F9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.6■■□□□ 1.69
Rpp40Q8R1F9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Rpp40Q8R1F9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.59■■□□□ 1.69
Rpp40Q8R1F9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.58■■□□□ 1.69
Rpp40Q8R1F9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Rpp40Q8R1F9 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.57■■□□□ 1.68
Rpp40Q8R1F9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.57■■□□□ 1.68
Rpp40Q8R1F9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rpp40Q8R1F9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rpp40Q8R1F9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms