Protein–RNA interactions for Protein: Q8R0W6

Ndfip1, NEDD4 family-interacting protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndfip1Q8R0W6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndfip1Q8R0W6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndfip1Q8R0W6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndfip1Q8R0W6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndfip1Q8R0W6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ndfip1Q8R0W6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Ndfip1Q8R0W6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ndfip1Q8R0W6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndfip1Q8R0W6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndfip1Q8R0W6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndfip1Q8R0W6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndfip1Q8R0W6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndfip1Q8R0W6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ndfip1Q8R0W6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndfip1Q8R0W6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ndfip1Q8R0W6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ndfip1Q8R0W6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ndfip1Q8R0W6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndfip1Q8R0W6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ndfip1Q8R0W6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ndfip1Q8R0W6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndfip1Q8R0W6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndfip1Q8R0W6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndfip1Q8R0W6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.5■□□□□ 0.55
Ndfip1Q8R0W6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndfip1Q8R0W6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.49■□□□□ 0.55
Ndfip1Q8R0W6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndfip1Q8R0W6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndfip1Q8R0W6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndfip1Q8R0W6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Ndfip1Q8R0W6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndfip1Q8R0W6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ndfip1Q8R0W6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.48■□□□□ 0.55
Ndfip1Q8R0W6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ndfip1Q8R0W6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ndfip1Q8R0W6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndfip1Q8R0W6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndfip1Q8R0W6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.47■□□□□ 0.55
Ndfip1Q8R0W6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndfip1Q8R0W6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndfip1Q8R0W6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndfip1Q8R0W6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndfip1Q8R0W6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ndfip1Q8R0W6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ndfip1Q8R0W6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndfip1Q8R0W6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ndfip1Q8R0W6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ndfip1Q8R0W6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ndfip1Q8R0W6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndfip1Q8R0W6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ndfip1Q8R0W6 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.44■□□□□ 0.54
Ndfip1Q8R0W6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndfip1Q8R0W6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ndfip1Q8R0W6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ndfip1Q8R0W6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndfip1Q8R0W6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndfip1Q8R0W6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndfip1Q8R0W6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndfip1Q8R0W6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Ndfip1Q8R0W6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndfip1Q8R0W6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndfip1Q8R0W6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndfip1Q8R0W6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Ndfip1Q8R0W6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndfip1Q8R0W6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ndfip1Q8R0W6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ndfip1Q8R0W6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndfip1Q8R0W6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ndfip1Q8R0W6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndfip1Q8R0W6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ndfip1Q8R0W6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndfip1Q8R0W6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ndfip1Q8R0W6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ndfip1Q8R0W6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndfip1Q8R0W6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndfip1Q8R0W6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndfip1Q8R0W6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndfip1Q8R0W6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndfip1Q8R0W6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndfip1Q8R0W6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.34■□□□□ 0.53
Ndfip1Q8R0W6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndfip1Q8R0W6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndfip1Q8R0W6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndfip1Q8R0W6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ndfip1Q8R0W6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ndfip1Q8R0W6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndfip1Q8R0W6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndfip1Q8R0W6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndfip1Q8R0W6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.31■□□□□ 0.52
Ndfip1Q8R0W6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndfip1Q8R0W6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndfip1Q8R0W6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ndfip1Q8R0W6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndfip1Q8R0W6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Ndfip1Q8R0W6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndfip1Q8R0W6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndfip1Q8R0W6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndfip1Q8R0W6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndfip1Q8R0W6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ndfip1Q8R0W6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms