Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf4Q8K4J2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ebf4Q8K4J2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ebf4Q8K4J2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ebf4Q8K4J2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.79■■□□□ 1.08
Ebf4Q8K4J2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ebf4Q8K4J2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ebf4Q8K4J2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ebf4Q8K4J2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ebf4Q8K4J2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf4Q8K4J2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ebf4Q8K4J2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Ebf4Q8K4J2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf4Q8K4J2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ebf4Q8K4J2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ebf4Q8K4J2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.75■■□□□ 1.07
Ebf4Q8K4J2 Gm25262-201ENSMUST00000174934 133 ntBASIC21.75■■□□□ 1.07
Ebf4Q8K4J2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ebf4Q8K4J2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf4Q8K4J2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf4Q8K4J2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf4Q8K4J2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ebf4Q8K4J2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf4Q8K4J2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Ebf4Q8K4J2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ebf4Q8K4J2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf4Q8K4J2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf4Q8K4J2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ebf4Q8K4J2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.7■■□□□ 1.07
Ebf4Q8K4J2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ebf4Q8K4J2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf4Q8K4J2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ebf4Q8K4J2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ebf4Q8K4J2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf4Q8K4J2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ebf4Q8K4J2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf4Q8K4J2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf4Q8K4J2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf4Q8K4J2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf4Q8K4J2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ebf4Q8K4J2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf4Q8K4J2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf4Q8K4J2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
Ebf4Q8K4J2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf4Q8K4J2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ebf4Q8K4J2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf4Q8K4J2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ebf4Q8K4J2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.65■■□□□ 1.06
Ebf4Q8K4J2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Ebf4Q8K4J2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ebf4Q8K4J2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ebf4Q8K4J2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.64■■□□□ 1.05
Ebf4Q8K4J2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ebf4Q8K4J2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ebf4Q8K4J2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf4Q8K4J2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf4Q8K4J2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf4Q8K4J2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf4Q8K4J2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Ebf4Q8K4J2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ebf4Q8K4J2 Gm27322-201ENSMUST00000184007 104 ntBASIC21.6■■□□□ 1.05
Ebf4Q8K4J2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.6■■□□□ 1.05
Ebf4Q8K4J2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf4Q8K4J2 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.59■■□□□ 1.05
Ebf4Q8K4J2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf4Q8K4J2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf4Q8K4J2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ebf4Q8K4J2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ebf4Q8K4J2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf4Q8K4J2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf4Q8K4J2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf4Q8K4J2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ebf4Q8K4J2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Ebf4Q8K4J2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf4Q8K4J2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf4Q8K4J2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ebf4Q8K4J2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ebf4Q8K4J2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.56■■□□□ 1.04
Ebf4Q8K4J2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf4Q8K4J2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf4Q8K4J2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf4Q8K4J2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ebf4Q8K4J2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.54■■□□□ 1.04
Ebf4Q8K4J2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ebf4Q8K4J2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ebf4Q8K4J2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms