Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp28Q8CGV8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp28Q8CGV8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp28Q8CGV8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp28Q8CGV8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp28Q8CGV8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp28Q8CGV8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.13■□□□□ 0.81
Mmp28Q8CGV8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.13■□□□□ 0.81
Mmp28Q8CGV8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Mmp28Q8CGV8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Mmp28Q8CGV8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mmp28Q8CGV8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Gm24804-201ENSMUST00000174982 85 ntBASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp28Q8CGV8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp28Q8CGV8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.04■□□□□ 0.8
Mmp28Q8CGV8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp28Q8CGV8 Peli2-204ENSMUST00000226513 1320 ntBASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp28Q8CGV8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp28Q8CGV8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp28Q8CGV8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp28Q8CGV8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp28Q8CGV8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp28Q8CGV8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mmp28Q8CGV8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp28Q8CGV8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Mmp28Q8CGV8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms