Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp28Q8CGV8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp28Q8CGV8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp28Q8CGV8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp28Q8CGV8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp28Q8CGV8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp28Q8CGV8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp28Q8CGV8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp28Q8CGV8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp28Q8CGV8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp28Q8CGV8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.13■□□□□ 0.81
Mmp28Q8CGV8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.13■□□□□ 0.81
Mmp28Q8CGV8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp28Q8CGV8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp28Q8CGV8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp28Q8CGV8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp28Q8CGV8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Mmp28Q8CGV8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Mmp28Q8CGV8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mmp28Q8CGV8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp28Q8CGV8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Gm24804-201ENSMUST00000174982 85 ntBASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Mmp28Q8CGV8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp28Q8CGV8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp28Q8CGV8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.04■□□□□ 0.8
Mmp28Q8CGV8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp28Q8CGV8 Peli2-204ENSMUST00000226513 1320 ntBASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp28Q8CGV8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp28Q8CGV8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp28Q8CGV8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp28Q8CGV8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp28Q8CGV8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.99■□□□□ 0.79
Mmp28Q8CGV8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp28Q8CGV8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp28Q8CGV8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp28Q8CGV8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp28Q8CGV8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp28Q8CGV8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp28Q8CGV8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mmp28Q8CGV8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp28Q8CGV8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Mmp28Q8CGV8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms