Protein–RNA interactions for Protein: Q8CFI0

Nedd4l, E3 ubiquitin-protein ligase NEDD4-like, mousemouse

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4lQ8CFI0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nedd4lQ8CFI0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Nedd4lQ8CFI0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.34■■□□□ 1.01
Nedd4lQ8CFI0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nedd4lQ8CFI0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nedd4lQ8CFI0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nedd4lQ8CFI0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.32■■□□□ 1
Nedd4lQ8CFI0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Nedd4lQ8CFI0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Nedd4lQ8CFI0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nedd4lQ8CFI0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.32■■□□□ 1
Nedd4lQ8CFI0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Nedd4lQ8CFI0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nedd4lQ8CFI0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nedd4lQ8CFI0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.31■■□□□ 1
Nedd4lQ8CFI0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nedd4lQ8CFI0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.31■■□□□ 1
Nedd4lQ8CFI0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nedd4lQ8CFI0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.31■■□□□ 1
Nedd4lQ8CFI0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nedd4lQ8CFI0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nedd4lQ8CFI0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Nedd4lQ8CFI0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nedd4lQ8CFI0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nedd4lQ8CFI0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nedd4lQ8CFI0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nedd4lQ8CFI0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Nedd4lQ8CFI0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nedd4lQ8CFI0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nedd4lQ8CFI0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nedd4lQ8CFI0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.27■■□□□ 1
Nedd4lQ8CFI0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Nedd4lQ8CFI0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.27■■□□□ 1
Nedd4lQ8CFI0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.27■■□□□ 1
Nedd4lQ8CFI0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nedd4lQ8CFI0 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.27■■□□□ 1
Nedd4lQ8CFI0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.27■■□□□ 1
Nedd4lQ8CFI0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nedd4lQ8CFI0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nedd4lQ8CFI0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Nedd4lQ8CFI0 Gm24970-201ENSMUST00000175582 82 ntBASIC21.26■□□□□ 0.99
Nedd4lQ8CFI0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nedd4lQ8CFI0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nedd4lQ8CFI0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Nedd4lQ8CFI0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nedd4lQ8CFI0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nedd4lQ8CFI0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nedd4lQ8CFI0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nedd4lQ8CFI0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nedd4lQ8CFI0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.23■□□□□ 0.99
Nedd4lQ8CFI0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.23■□□□□ 0.99
Nedd4lQ8CFI0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.23■□□□□ 0.99
Nedd4lQ8CFI0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nedd4lQ8CFI0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nedd4lQ8CFI0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Nedd4lQ8CFI0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Nedd4lQ8CFI0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.22■□□□□ 0.99
Nedd4lQ8CFI0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nedd4lQ8CFI0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Nedd4lQ8CFI0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nedd4lQ8CFI0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nedd4lQ8CFI0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nedd4lQ8CFI0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Nedd4lQ8CFI0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nedd4lQ8CFI0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nedd4lQ8CFI0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nedd4lQ8CFI0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nedd4lQ8CFI0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nedd4lQ8CFI0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nedd4lQ8CFI0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.18■□□□□ 0.98
Nedd4lQ8CFI0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Nedd4lQ8CFI0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4lQ8CFI0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4lQ8CFI0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4lQ8CFI0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4lQ8CFI0 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.15■□□□□ 0.98
Nedd4lQ8CFI0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4lQ8CFI0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4lQ8CFI0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nedd4lQ8CFI0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nedd4lQ8CFI0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nedd4lQ8CFI0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Nedd4lQ8CFI0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Nedd4lQ8CFI0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4lQ8CFI0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4lQ8CFI0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4lQ8CFI0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4lQ8CFI0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4lQ8CFI0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nedd4lQ8CFI0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Nedd4lQ8CFI0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nedd4lQ8CFI0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.11■□□□□ 0.97
Nedd4lQ8CFI0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms