Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc49a3Q8CE47 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc49a3Q8CE47 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc49a3Q8CE47 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc49a3Q8CE47 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc49a3Q8CE47 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Slc49a3Q8CE47 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc49a3Q8CE47 Gm8109-201ENSMUST00000194076 746 ntBASIC21.89■■□□□ 1.09
Slc49a3Q8CE47 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc49a3Q8CE47 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc49a3Q8CE47 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.88■■□□□ 1.09
Slc49a3Q8CE47 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Slc49a3Q8CE47 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc49a3Q8CE47 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc49a3Q8CE47 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc49a3Q8CE47 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc49a3Q8CE47 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc49a3Q8CE47 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Slc49a3Q8CE47 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Slc49a3Q8CE47 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc49a3Q8CE47 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Slc49a3Q8CE47 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Slc49a3Q8CE47 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Slc49a3Q8CE47 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Slc49a3Q8CE47 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc49a3Q8CE47 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc49a3Q8CE47 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.84■■□□□ 1.09
Slc49a3Q8CE47 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc49a3Q8CE47 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Slc49a3Q8CE47 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc49a3Q8CE47 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc49a3Q8CE47 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc49a3Q8CE47 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc49a3Q8CE47 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc49a3Q8CE47 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc49a3Q8CE47 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc49a3Q8CE47 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Slc49a3Q8CE47 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Slc49a3Q8CE47 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Slc49a3Q8CE47 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc49a3Q8CE47 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc49a3Q8CE47 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc49a3Q8CE47 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc49a3Q8CE47 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc49a3Q8CE47 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc49a3Q8CE47 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc49a3Q8CE47 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc49a3Q8CE47 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc49a3Q8CE47 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc49a3Q8CE47 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc49a3Q8CE47 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc49a3Q8CE47 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc49a3Q8CE47 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc49a3Q8CE47 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Slc49a3Q8CE47 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc49a3Q8CE47 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Slc49a3Q8CE47 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc49a3Q8CE47 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc49a3Q8CE47 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc49a3Q8CE47 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc49a3Q8CE47 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Slc49a3Q8CE47 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc49a3Q8CE47 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc49a3Q8CE47 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.71■■□□□ 1.07
Slc49a3Q8CE47 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Slc49a3Q8CE47 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Slc49a3Q8CE47 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Slc49a3Q8CE47 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc49a3Q8CE47 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Slc49a3Q8CE47 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc49a3Q8CE47 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc49a3Q8CE47 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc49a3Q8CE47 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Slc49a3Q8CE47 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc49a3Q8CE47 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc49a3Q8CE47 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.67■■□□□ 1.06
Slc49a3Q8CE47 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc49a3Q8CE47 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc49a3Q8CE47 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc49a3Q8CE47 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc49a3Q8CE47 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc49a3Q8CE47 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc49a3Q8CE47 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc49a3Q8CE47 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slc49a3Q8CE47 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc49a3Q8CE47 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc49a3Q8CE47 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc49a3Q8CE47 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc49a3Q8CE47 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Slc49a3Q8CE47 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.62■■□□□ 1.05
Slc49a3Q8CE47 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.62■■□□□ 1.05
Slc49a3Q8CE47 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms