Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb7Q8CDY9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb7Q8CDY9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdhb7Q8CDY9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.83■■□□□ 1.41
Pcdhb7Q8CDY9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb7Q8CDY9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb7Q8CDY9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb7Q8CDY9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb7Q8CDY9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb7Q8CDY9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb7Q8CDY9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb7Q8CDY9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb7Q8CDY9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb7Q8CDY9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdhb7Q8CDY9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb7Q8CDY9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Pcdhb7Q8CDY9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb7Q8CDY9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb7Q8CDY9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb7Q8CDY9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb7Q8CDY9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb7Q8CDY9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb7Q8CDY9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdhb7Q8CDY9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Pcdhb7Q8CDY9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Pcdhb7Q8CDY9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb7Q8CDY9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb7Q8CDY9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb7Q8CDY9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Pcdhb7Q8CDY9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb7Q8CDY9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb7Q8CDY9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb7Q8CDY9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb7Q8CDY9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb7Q8CDY9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.63■■□□□ 1.37
Pcdhb7Q8CDY9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb7Q8CDY9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb7Q8CDY9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb7Q8CDY9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.6■■□□□ 1.37
Pcdhb7Q8CDY9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb7Q8CDY9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb7Q8CDY9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb7Q8CDY9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb7Q8CDY9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb7Q8CDY9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.36
Pcdhb7Q8CDY9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb7Q8CDY9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
Pcdhb7Q8CDY9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb7Q8CDY9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb7Q8CDY9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb7Q8CDY9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms