Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb7Q8CDY9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb7Q8CDY9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdhb7Q8CDY9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.83■■□□□ 1.41
Pcdhb7Q8CDY9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb7Q8CDY9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb7Q8CDY9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb7Q8CDY9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb7Q8CDY9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb7Q8CDY9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb7Q8CDY9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb7Q8CDY9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb7Q8CDY9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb7Q8CDY9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb7Q8CDY9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb7Q8CDY9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdhb7Q8CDY9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb7Q8CDY9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.73■■□□□ 1.39
Pcdhb7Q8CDY9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Pcdhb7Q8CDY9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb7Q8CDY9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb7Q8CDY9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb7Q8CDY9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb7Q8CDY9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb7Q8CDY9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb7Q8CDY9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdhb7Q8CDY9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Pcdhb7Q8CDY9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Pcdhb7Q8CDY9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb7Q8CDY9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb7Q8CDY9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb7Q8CDY9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb7Q8CDY9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Pcdhb7Q8CDY9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb7Q8CDY9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb7Q8CDY9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb7Q8CDY9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb7Q8CDY9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb7Q8CDY9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.63■■□□□ 1.37
Pcdhb7Q8CDY9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb7Q8CDY9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb7Q8CDY9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb7Q8CDY9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.6■■□□□ 1.37
Pcdhb7Q8CDY9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb7Q8CDY9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb7Q8CDY9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb7Q8CDY9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb7Q8CDY9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb7Q8CDY9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.36
Pcdhb7Q8CDY9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb7Q8CDY9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
Pcdhb7Q8CDY9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
Pcdhb7Q8CDY9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb7Q8CDY9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb7Q8CDY9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb7Q8CDY9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb7Q8CDY9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb7Q8CDY9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.5■■□□□ 1.35
Pcdhb7Q8CDY9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb7Q8CDY9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb7Q8CDY9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms