Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Q8CD60 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Q8CD60 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Q8CD60 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Q8CD60 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Q8CD60 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Q8CD60 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.26■■□□□ 1.63
Q8CD60 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Q8CD60 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Q8CD60 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.25■■□□□ 1.63
Q8CD60 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Q8CD60 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Q8CD60 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.24■■□□□ 1.63
Q8CD60 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.24■■□□□ 1.63
Q8CD60 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Q8CD60 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Q8CD60 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Q8CD60 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.23■■□□□ 1.63
Q8CD60 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Q8CD60 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Q8CD60 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Q8CD60 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Q8CD60 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.22■■□□□ 1.63
Q8CD60 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Q8CD60 Gm30023-201ENSMUST00000197970 889 ntBASIC25.21■■□□□ 1.63
Q8CD60 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.2■■□□□ 1.62
Q8CD60 Nkain2-201ENSMUST00000092602 558 ntBASIC25.19■■□□□ 1.62
Q8CD60 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Q8CD60 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Q8CD60 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.18■■□□□ 1.62
Q8CD60 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.18■■□□□ 1.62
Q8CD60 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Q8CD60 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Q8CD60 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Q8CD60 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Q8CD60 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.16■■□□□ 1.62
Q8CD60 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
Q8CD60 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Q8CD60 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Q8CD60 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Q8CD60 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Q8CD60 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Q8CD60 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Q8CD60 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Q8CD60 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Q8CD60 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Q8CD60 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
Q8CD60 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Q8CD60 Gm6821-201ENSMUST00000107540 542 ntBASIC25.11■■□□□ 1.61
Q8CD60 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Q8CD60 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Q8CD60 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Q8CD60 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Q8CD60 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Q8CD60 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Q8CD60 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Q8CD60 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Q8CD60 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.08■■□□□ 1.61
Q8CD60 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Q8CD60 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.08■■□□□ 1.61
Q8CD60 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Q8CD60 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Q8CD60 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Q8CD60 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Q8CD60 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Q8CD60 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Q8CD60 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Q8CD60 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Q8CD60 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Q8CD60 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
Q8CD60 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Q8CD60 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Q8CD60 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
Q8CD60 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Q8CD60 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Q8CD60 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Q8CD60 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25■■□□□ 1.59
Q8CD60 Gm8503-201ENSMUST00000118131 455 ntBASIC25■■□□□ 1.59
Q8CD60 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Q8CD60 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Q8CD60 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.99■■□□□ 1.59
Q8CD60 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.99■■□□□ 1.59
Q8CD60 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.98■■□□□ 1.59
Q8CD60 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Q8CD60 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.98■■□□□ 1.59
Q8CD60 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Q8CD60 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Q8CD60 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Q8CD60 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.96■■□□□ 1.59
Q8CD60 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.96■■□□□ 1.59
Q8CD60 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Q8CD60 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Q8CD60 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Q8CD60 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.93■■□□□ 1.58
Q8CD60 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Q8CD60 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Q8CD60 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Q8CD60 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Q8CD60 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Q8CD60 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms