Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Aph1bQ8C7N7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Aph1bQ8C7N7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.88■■□□□ 1.41
Aph1bQ8C7N7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Aph1bQ8C7N7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Aph1bQ8C7N7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Aph1bQ8C7N7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Aph1bQ8C7N7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Aph1bQ8C7N7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Aph1bQ8C7N7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Aph1bQ8C7N7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Aph1bQ8C7N7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Aph1bQ8C7N7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Aph1bQ8C7N7 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.84■■□□□ 1.41
Aph1bQ8C7N7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Aph1bQ8C7N7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Aph1bQ8C7N7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Aph1bQ8C7N7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.83■■□□□ 1.4
Aph1bQ8C7N7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Aph1bQ8C7N7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Aph1bQ8C7N7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Aph1bQ8C7N7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Aph1bQ8C7N7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Aph1bQ8C7N7 Zfp131-205ENSMUST00000223812 663 ntBASIC23.79■■□□□ 1.4
Aph1bQ8C7N7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Aph1bQ8C7N7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Aph1bQ8C7N7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.77■■□□□ 1.4
Aph1bQ8C7N7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Aph1bQ8C7N7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Aph1bQ8C7N7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.76■■□□□ 1.39
Aph1bQ8C7N7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Aph1bQ8C7N7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Aph1bQ8C7N7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Aph1bQ8C7N7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Aph1bQ8C7N7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Aph1bQ8C7N7 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.75■■□□□ 1.39
Aph1bQ8C7N7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Aph1bQ8C7N7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.73■■□□□ 1.39
Aph1bQ8C7N7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.73■■□□□ 1.39
Aph1bQ8C7N7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Aph1bQ8C7N7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Aph1bQ8C7N7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Aph1bQ8C7N7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Aph1bQ8C7N7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Aph1bQ8C7N7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Aph1bQ8C7N7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.7■■□□□ 1.38
Aph1bQ8C7N7 Gm9397-201ENSMUST00000200125 605 ntBASIC23.7■■□□□ 1.38
Aph1bQ8C7N7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.7■■□□□ 1.38
Aph1bQ8C7N7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Aph1bQ8C7N7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
Aph1bQ8C7N7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Aph1bQ8C7N7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.69■■□□□ 1.38
Aph1bQ8C7N7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.68■■□□□ 1.38
Aph1bQ8C7N7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Aph1bQ8C7N7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Aph1bQ8C7N7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Aph1bQ8C7N7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.65■■□□□ 1.38
Aph1bQ8C7N7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Aph1bQ8C7N7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Aph1bQ8C7N7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Aph1bQ8C7N7 Gm24970-201ENSMUST00000175582 82 ntBASIC23.63■■□□□ 1.37
Aph1bQ8C7N7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Aph1bQ8C7N7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Aph1bQ8C7N7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Aph1bQ8C7N7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Aph1bQ8C7N7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Aph1bQ8C7N7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Aph1bQ8C7N7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.59■■□□□ 1.37
Aph1bQ8C7N7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Aph1bQ8C7N7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Aph1bQ8C7N7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Aph1bQ8C7N7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.57■■□□□ 1.36
Aph1bQ8C7N7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.57■■□□□ 1.36
Aph1bQ8C7N7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Aph1bQ8C7N7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Aph1bQ8C7N7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Aph1bQ8C7N7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.56■■□□□ 1.36
Aph1bQ8C7N7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Aph1bQ8C7N7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Aph1bQ8C7N7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.55■■□□□ 1.36
Aph1bQ8C7N7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Aph1bQ8C7N7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Aph1bQ8C7N7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Aph1bQ8C7N7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Aph1bQ8C7N7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Aph1bQ8C7N7 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.53■■□□□ 1.36
Aph1bQ8C7N7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Aph1bQ8C7N7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Aph1bQ8C7N7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Aph1bQ8C7N7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Aph1bQ8C7N7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Aph1bQ8C7N7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Aph1bQ8C7N7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Aph1bQ8C7N7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Aph1bQ8C7N7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Aph1bQ8C7N7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Aph1bQ8C7N7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Aph1bQ8C7N7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Aph1bQ8C7N7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Aph1bQ8C7N7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms