Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cstf2tQ8C7E9 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.57■■□□□ 1.52
Cstf2tQ8C7E9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cstf2tQ8C7E9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.57■■□□□ 1.52
Cstf2tQ8C7E9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Cstf2tQ8C7E9 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.57■■□□□ 1.52
Cstf2tQ8C7E9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cstf2tQ8C7E9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cstf2tQ8C7E9 Scarna2-201ENSMUST00000157560 414 ntBASIC24.55■■□□□ 1.52
Cstf2tQ8C7E9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cstf2tQ8C7E9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cstf2tQ8C7E9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cstf2tQ8C7E9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cstf2tQ8C7E9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
Cstf2tQ8C7E9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cstf2tQ8C7E9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.53■■□□□ 1.52
Cstf2tQ8C7E9 Gm4799-201ENSMUST00000095396 657 ntBASIC24.53■■□□□ 1.52
Cstf2tQ8C7E9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cstf2tQ8C7E9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cstf2tQ8C7E9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cstf2tQ8C7E9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cstf2tQ8C7E9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Cstf2tQ8C7E9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.51■■□□□ 1.51
Cstf2tQ8C7E9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cstf2tQ8C7E9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cstf2tQ8C7E9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.5■■□□□ 1.51
Cstf2tQ8C7E9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cstf2tQ8C7E9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cstf2tQ8C7E9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cstf2tQ8C7E9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.49■■□□□ 1.51
Cstf2tQ8C7E9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cstf2tQ8C7E9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cstf2tQ8C7E9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
Cstf2tQ8C7E9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Cstf2tQ8C7E9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cstf2tQ8C7E9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cstf2tQ8C7E9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cstf2tQ8C7E9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cstf2tQ8C7E9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cstf2tQ8C7E9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.44■■□□□ 1.5
Cstf2tQ8C7E9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cstf2tQ8C7E9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.44■■□□□ 1.5
Cstf2tQ8C7E9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cstf2tQ8C7E9 Gm11687-201ENSMUST00000118911 886 ntBASIC24.43■■□□□ 1.5
Cstf2tQ8C7E9 Gm27502-201ENSMUST00000183495 199 ntBASIC24.43■■□□□ 1.5
Cstf2tQ8C7E9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cstf2tQ8C7E9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cstf2tQ8C7E9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cstf2tQ8C7E9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cstf2tQ8C7E9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cstf2tQ8C7E9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cstf2tQ8C7E9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cstf2tQ8C7E9 Gm16437-201ENSMUST00000025669 507 ntBASIC24.4■■□□□ 1.5
Cstf2tQ8C7E9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cstf2tQ8C7E9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cstf2tQ8C7E9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cstf2tQ8C7E9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cstf2tQ8C7E9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.39■■□□□ 1.49
Cstf2tQ8C7E9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cstf2tQ8C7E9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cstf2tQ8C7E9 Gm7332-201ENSMUST00000118351 454 ntBASIC24.38■■□□□ 1.49
Cstf2tQ8C7E9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cstf2tQ8C7E9 Gm9806-201ENSMUST00000051080 552 ntBASIC24.38■■□□□ 1.49
Cstf2tQ8C7E9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.37■■□□□ 1.49
Cstf2tQ8C7E9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cstf2tQ8C7E9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cstf2tQ8C7E9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cstf2tQ8C7E9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cstf2tQ8C7E9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cstf2tQ8C7E9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cstf2tQ8C7E9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cstf2tQ8C7E9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cstf2tQ8C7E9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cstf2tQ8C7E9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.34■■□□□ 1.49
Cstf2tQ8C7E9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cstf2tQ8C7E9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
Cstf2tQ8C7E9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cstf2tQ8C7E9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cstf2tQ8C7E9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cstf2tQ8C7E9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.32■■□□□ 1.48
Cstf2tQ8C7E9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Cstf2tQ8C7E9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cstf2tQ8C7E9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cstf2tQ8C7E9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Cstf2tQ8C7E9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cstf2tQ8C7E9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cstf2tQ8C7E9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cstf2tQ8C7E9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cstf2tQ8C7E9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cstf2tQ8C7E9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.28■■□□□ 1.48
Cstf2tQ8C7E9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.27■■□□□ 1.48
Cstf2tQ8C7E9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cstf2tQ8C7E9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cstf2tQ8C7E9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cstf2tQ8C7E9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cstf2tQ8C7E9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cstf2tQ8C7E9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cstf2tQ8C7E9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cstf2tQ8C7E9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cstf2tQ8C7E9 Gm5812-201ENSMUST00000061073 957 ntBASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms