Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap54Q8C6S9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Cfap54Q8C6S9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cfap54Q8C6S9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.65■■□□□ 1.38
Cfap54Q8C6S9 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.64■■□□□ 1.38
Cfap54Q8C6S9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cfap54Q8C6S9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap54Q8C6S9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap54Q8C6S9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap54Q8C6S9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.63■■□□□ 1.37
Cfap54Q8C6S9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap54Q8C6S9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cfap54Q8C6S9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cfap54Q8C6S9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cfap54Q8C6S9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cfap54Q8C6S9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap54Q8C6S9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap54Q8C6S9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cfap54Q8C6S9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap54Q8C6S9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap54Q8C6S9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap54Q8C6S9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap54Q8C6S9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cfap54Q8C6S9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cfap54Q8C6S9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cfap54Q8C6S9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cfap54Q8C6S9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Gm12366-201ENSMUST00000121722 873 ntBASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Gm5786-201ENSMUST00000085368 882 ntBASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cfap54Q8C6S9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap54Q8C6S9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap54Q8C6S9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap54Q8C6S9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap54Q8C6S9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap54Q8C6S9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap54Q8C6S9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cfap54Q8C6S9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cfap54Q8C6S9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Cfap54Q8C6S9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Cfap54Q8C6S9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cfap54Q8C6S9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cfap54Q8C6S9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Cfap54Q8C6S9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cfap54Q8C6S9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cfap54Q8C6S9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cfap54Q8C6S9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.5■■□□□ 1.35
Cfap54Q8C6S9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.5■■□□□ 1.35
Cfap54Q8C6S9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cfap54Q8C6S9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cfap54Q8C6S9 Particl-201ENSMUST00000205370 1560 ntBASIC23.48■■□□□ 1.35
Cfap54Q8C6S9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
Cfap54Q8C6S9 Scarna2-201ENSMUST00000157560 414 ntBASIC23.48■■□□□ 1.35
Cfap54Q8C6S9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.47■■□□□ 1.35
Cfap54Q8C6S9 Gm9806-201ENSMUST00000051080 552 ntBASIC23.47■■□□□ 1.35
Cfap54Q8C6S9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cfap54Q8C6S9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.46■■□□□ 1.35
Cfap54Q8C6S9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cfap54Q8C6S9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.46■■□□□ 1.35
Cfap54Q8C6S9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cfap54Q8C6S9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cfap54Q8C6S9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Cfap54Q8C6S9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cfap54Q8C6S9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cfap54Q8C6S9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cfap54Q8C6S9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cfap54Q8C6S9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Cfap54Q8C6S9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
Cfap54Q8C6S9 Gm22567-201ENSMUST00000175542 342 ntBASIC23.42■■□□□ 1.34
Cfap54Q8C6S9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cfap54Q8C6S9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Cfap54Q8C6S9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cfap54Q8C6S9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cfap54Q8C6S9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Cfap54Q8C6S9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cfap54Q8C6S9 Gm5812-201ENSMUST00000061073 957 ntBASIC23.4■■□□□ 1.34
Cfap54Q8C6S9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cfap54Q8C6S9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cfap54Q8C6S9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.39■■□□□ 1.34
Cfap54Q8C6S9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cfap54Q8C6S9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.39■■□□□ 1.34
Cfap54Q8C6S9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cfap54Q8C6S9 Gm11687-201ENSMUST00000118911 886 ntBASIC23.38■■□□□ 1.33
Cfap54Q8C6S9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cfap54Q8C6S9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cfap54Q8C6S9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.37■■□□□ 1.33
Cfap54Q8C6S9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cfap54Q8C6S9 Gm16437-201ENSMUST00000025669 507 ntBASIC23.37■■□□□ 1.33
Cfap54Q8C6S9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap54Q8C6S9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap54Q8C6S9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.36■■□□□ 1.33
Cfap54Q8C6S9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.35■■□□□ 1.33
Cfap54Q8C6S9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap54Q8C6S9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.35■■□□□ 1.33
Cfap54Q8C6S9 Gm30023-201ENSMUST00000197970 889 ntBASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms