Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col6a6Q8C6K9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Col6a6Q8C6K9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col6a6Q8C6K9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col6a6Q8C6K9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.09■■□□□ 1.13
Col6a6Q8C6K9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Col6a6Q8C6K9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col6a6Q8C6K9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.08■■□□□ 1.12
Col6a6Q8C6K9 Gm12366-201ENSMUST00000121722 873 ntBASIC22.08■■□□□ 1.12
Col6a6Q8C6K9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.08■■□□□ 1.12
Col6a6Q8C6K9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.08■■□□□ 1.12
Col6a6Q8C6K9 Gm5786-201ENSMUST00000085368 882 ntBASIC22.08■■□□□ 1.12
Col6a6Q8C6K9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col6a6Q8C6K9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col6a6Q8C6K9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col6a6Q8C6K9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col6a6Q8C6K9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Col6a6Q8C6K9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col6a6Q8C6K9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.04■■□□□ 1.12
Col6a6Q8C6K9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col6a6Q8C6K9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col6a6Q8C6K9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col6a6Q8C6K9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Col6a6Q8C6K9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col6a6Q8C6K9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col6a6Q8C6K9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col6a6Q8C6K9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.99■■□□□ 1.11
Col6a6Q8C6K9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col6a6Q8C6K9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col6a6Q8C6K9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col6a6Q8C6K9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col6a6Q8C6K9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col6a6Q8C6K9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col6a6Q8C6K9 Particl-201ENSMUST00000205370 1560 ntBASIC21.95■■□□□ 1.1
Col6a6Q8C6K9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a6Q8C6K9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a6Q8C6K9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a6Q8C6K9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col6a6Q8C6K9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col6a6Q8C6K9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col6a6Q8C6K9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col6a6Q8C6K9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.92■■□□□ 1.1
Col6a6Q8C6K9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a6Q8C6K9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a6Q8C6K9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col6a6Q8C6K9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Col6a6Q8C6K9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col6a6Q8C6K9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col6a6Q8C6K9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col6a6Q8C6K9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col6a6Q8C6K9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col6a6Q8C6K9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col6a6Q8C6K9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.88■■□□□ 1.09
Col6a6Q8C6K9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.87■■□□□ 1.09
Col6a6Q8C6K9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Col6a6Q8C6K9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col6a6Q8C6K9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col6a6Q8C6K9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col6a6Q8C6K9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.84■■□□□ 1.09
Col6a6Q8C6K9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col6a6Q8C6K9 Gm16437-201ENSMUST00000025669 507 ntBASIC21.84■■□□□ 1.09
Col6a6Q8C6K9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col6a6Q8C6K9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col6a6Q8C6K9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Col6a6Q8C6K9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col6a6Q8C6K9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col6a6Q8C6K9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col6a6Q8C6K9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col6a6Q8C6K9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col6a6Q8C6K9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.81■■□□□ 1.08
Col6a6Q8C6K9 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.81■■□□□ 1.08
Col6a6Q8C6K9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Col6a6Q8C6K9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col6a6Q8C6K9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Col6a6Q8C6K9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col6a6Q8C6K9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col6a6Q8C6K9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col6a6Q8C6K9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col6a6Q8C6K9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.78■■□□□ 1.08
Col6a6Q8C6K9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.78■■□□□ 1.08
Col6a6Q8C6K9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.78■■□□□ 1.08
Col6a6Q8C6K9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col6a6Q8C6K9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col6a6Q8C6K9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col6a6Q8C6K9 Gm11687-201ENSMUST00000118911 886 ntBASIC21.77■■□□□ 1.08
Col6a6Q8C6K9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.77■■□□□ 1.08
Col6a6Q8C6K9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col6a6Q8C6K9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.77■■□□□ 1.08
Col6a6Q8C6K9 Gm30023-201ENSMUST00000197970 889 ntBASIC21.77■■□□□ 1.08
Col6a6Q8C6K9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.76■■□□□ 1.07
Col6a6Q8C6K9 Gm9806-201ENSMUST00000051080 552 ntBASIC21.76■■□□□ 1.07
Col6a6Q8C6K9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col6a6Q8C6K9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.76■■□□□ 1.07
Col6a6Q8C6K9 Scarna2-201ENSMUST00000157560 414 ntBASIC21.76■■□□□ 1.07
Col6a6Q8C6K9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col6a6Q8C6K9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col6a6Q8C6K9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col6a6Q8C6K9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col6a6Q8C6K9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.73■■□□□ 1.07
Col6a6Q8C6K9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms