Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smim4Q8C1Q6 Zfp131-205ENSMUST00000223812 663 ntBASIC19.88■□□□□ 0.77
Smim4Q8C1Q6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smim4Q8C1Q6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim4Q8C1Q6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim4Q8C1Q6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smim4Q8C1Q6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim4Q8C1Q6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.86■□□□□ 0.77
Smim4Q8C1Q6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smim4Q8C1Q6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim4Q8C1Q6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim4Q8C1Q6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.85■□□□□ 0.77
Smim4Q8C1Q6 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.85■□□□□ 0.77
Smim4Q8C1Q6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim4Q8C1Q6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smim4Q8C1Q6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim4Q8C1Q6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim4Q8C1Q6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Smim4Q8C1Q6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Smim4Q8C1Q6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim4Q8C1Q6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.82■□□□□ 0.76
Smim4Q8C1Q6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Smim4Q8C1Q6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smim4Q8C1Q6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.81■□□□□ 0.76
Smim4Q8C1Q6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smim4Q8C1Q6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smim4Q8C1Q6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smim4Q8C1Q6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smim4Q8C1Q6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smim4Q8C1Q6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.79■□□□□ 0.76
Smim4Q8C1Q6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smim4Q8C1Q6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smim4Q8C1Q6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim4Q8C1Q6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smim4Q8C1Q6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.78■□□□□ 0.76
Smim4Q8C1Q6 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.78■□□□□ 0.76
Smim4Q8C1Q6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim4Q8C1Q6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smim4Q8C1Q6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.77■□□□□ 0.76
Smim4Q8C1Q6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smim4Q8C1Q6 Gm9397-201ENSMUST00000200125 605 ntBASIC19.76■□□□□ 0.75
Smim4Q8C1Q6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.76■□□□□ 0.75
Smim4Q8C1Q6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Smim4Q8C1Q6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim4Q8C1Q6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smim4Q8C1Q6 Gm24970-201ENSMUST00000175582 82 ntBASIC19.75■□□□□ 0.75
Smim4Q8C1Q6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smim4Q8C1Q6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.75■□□□□ 0.75
Smim4Q8C1Q6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smim4Q8C1Q6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Smim4Q8C1Q6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim4Q8C1Q6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim4Q8C1Q6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.74■□□□□ 0.75
Smim4Q8C1Q6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim4Q8C1Q6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smim4Q8C1Q6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim4Q8C1Q6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim4Q8C1Q6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smim4Q8C1Q6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.73■□□□□ 0.75
Smim4Q8C1Q6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smim4Q8C1Q6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.73■□□□□ 0.75
Smim4Q8C1Q6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smim4Q8C1Q6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.73■□□□□ 0.75
Smim4Q8C1Q6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim4Q8C1Q6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim4Q8C1Q6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim4Q8C1Q6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smim4Q8C1Q6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim4Q8C1Q6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim4Q8C1Q6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim4Q8C1Q6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.7■□□□□ 0.74
Smim4Q8C1Q6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim4Q8C1Q6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim4Q8C1Q6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smim4Q8C1Q6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smim4Q8C1Q6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim4Q8C1Q6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim4Q8C1Q6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smim4Q8C1Q6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim4Q8C1Q6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim4Q8C1Q6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smim4Q8C1Q6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smim4Q8C1Q6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Smim4Q8C1Q6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Smim4Q8C1Q6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smim4Q8C1Q6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim4Q8C1Q6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim4Q8C1Q6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim4Q8C1Q6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smim4Q8C1Q6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim4Q8C1Q6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smim4Q8C1Q6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim4Q8C1Q6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms