Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atpaf1Q811I0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atpaf1Q811I0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atpaf1Q811I0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atpaf1Q811I0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atpaf1Q811I0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atpaf1Q811I0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atpaf1Q811I0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atpaf1Q811I0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atpaf1Q811I0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Atpaf1Q811I0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atpaf1Q811I0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atpaf1Q811I0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atpaf1Q811I0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atpaf1Q811I0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atpaf1Q811I0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atpaf1Q811I0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atpaf1Q811I0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Atpaf1Q811I0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atpaf1Q811I0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atpaf1Q811I0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atpaf1Q811I0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atpaf1Q811I0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.41■□□□□ 0.7
Atpaf1Q811I0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atpaf1Q811I0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atpaf1Q811I0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atpaf1Q811I0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Atpaf1Q811I0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Atpaf1Q811I0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atpaf1Q811I0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atpaf1Q811I0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atpaf1Q811I0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atpaf1Q811I0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Atpaf1Q811I0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atpaf1Q811I0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atpaf1Q811I0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atpaf1Q811I0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atpaf1Q811I0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atpaf1Q811I0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atpaf1Q811I0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atpaf1Q811I0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Atpaf1Q811I0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atpaf1Q811I0 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.37■□□□□ 0.69
Atpaf1Q811I0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atpaf1Q811I0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atpaf1Q811I0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atpaf1Q811I0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atpaf1Q811I0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atpaf1Q811I0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atpaf1Q811I0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Atpaf1Q811I0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atpaf1Q811I0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Atpaf1Q811I0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Atpaf1Q811I0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atpaf1Q811I0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atpaf1Q811I0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atpaf1Q811I0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atpaf1Q811I0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atpaf1Q811I0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atpaf1Q811I0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atpaf1Q811I0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atpaf1Q811I0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Atpaf1Q811I0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.3■□□□□ 0.68
Atpaf1Q811I0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Atpaf1Q811I0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.3■□□□□ 0.68
Atpaf1Q811I0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atpaf1Q811I0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Atpaf1Q811I0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Atpaf1Q811I0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Atpaf1Q811I0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atpaf1Q811I0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atpaf1Q811I0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Atpaf1Q811I0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atpaf1Q811I0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Atpaf1Q811I0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atpaf1Q811I0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atpaf1Q811I0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.27■□□□□ 0.68
Atpaf1Q811I0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atpaf1Q811I0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atpaf1Q811I0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atpaf1Q811I0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atpaf1Q811I0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.27■□□□□ 0.68
Atpaf1Q811I0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.27■□□□□ 0.67
Atpaf1Q811I0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atpaf1Q811I0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.26■□□□□ 0.67
Atpaf1Q811I0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atpaf1Q811I0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atpaf1Q811I0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atpaf1Q811I0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atpaf1Q811I0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atpaf1Q811I0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atpaf1Q811I0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atpaf1Q811I0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atpaf1Q811I0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atpaf1Q811I0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atpaf1Q811I0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atpaf1Q811I0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atpaf1Q811I0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms