Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Usp6nlQ80XC3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.9■■□□□ 1.9
Usp6nlQ80XC3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Usp6nlQ80XC3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Usp6nlQ80XC3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Usp6nlQ80XC3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Usp6nlQ80XC3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Usp6nlQ80XC3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Usp6nlQ80XC3 Cap2-205ENSMUST00000225824 1634 ntBASIC26.87■■□□□ 1.89
Usp6nlQ80XC3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Usp6nlQ80XC3 Particl-201ENSMUST00000205370 1560 ntBASIC26.85■■□□□ 1.89
Usp6nlQ80XC3 Gm6311-201ENSMUST00000073790 878 ntBASIC26.85■■□□□ 1.89
Usp6nlQ80XC3 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.85■■□□□ 1.89
Usp6nlQ80XC3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Usp6nlQ80XC3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.84■■□□□ 1.89
Usp6nlQ80XC3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Usp6nlQ80XC3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.84■■□□□ 1.89
Usp6nlQ80XC3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.83■■□□□ 1.89
Usp6nlQ80XC3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Usp6nlQ80XC3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Usp6nlQ80XC3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Usp6nlQ80XC3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.81■■□□□ 1.88
Usp6nlQ80XC3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Usp6nlQ80XC3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.8■■□□□ 1.88
Usp6nlQ80XC3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Usp6nlQ80XC3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Usp6nlQ80XC3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
Usp6nlQ80XC3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Usp6nlQ80XC3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.78■■□□□ 1.88
Usp6nlQ80XC3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Usp6nlQ80XC3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp6nlQ80XC3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp6nlQ80XC3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.77■■□□□ 1.88
Usp6nlQ80XC3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Usp6nlQ80XC3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Usp6nlQ80XC3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Usp6nlQ80XC3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Usp6nlQ80XC3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.74■■□□□ 1.87
Usp6nlQ80XC3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp6nlQ80XC3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Usp6nlQ80XC3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.72■■□□□ 1.87
Usp6nlQ80XC3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp6nlQ80XC3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Usp6nlQ80XC3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Usp6nlQ80XC3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Usp6nlQ80XC3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Usp6nlQ80XC3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.69■■□□□ 1.86
Usp6nlQ80XC3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Usp6nlQ80XC3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp6nlQ80XC3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp6nlQ80XC3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Usp6nlQ80XC3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp6nlQ80XC3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Usp6nlQ80XC3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Usp6nlQ80XC3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp6nlQ80XC3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.65■■□□□ 1.86
Usp6nlQ80XC3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp6nlQ80XC3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Usp6nlQ80XC3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Usp6nlQ80XC3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp6nlQ80XC3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Usp6nlQ80XC3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp6nlQ80XC3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp6nlQ80XC3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.61■■□□□ 1.85
Usp6nlQ80XC3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp6nlQ80XC3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Usp6nlQ80XC3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Usp6nlQ80XC3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.59■■□□□ 1.85
Usp6nlQ80XC3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp6nlQ80XC3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp6nlQ80XC3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Usp6nlQ80XC3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.58■■□□□ 1.85
Usp6nlQ80XC3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.57■■□□□ 1.84
Usp6nlQ80XC3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp6nlQ80XC3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Usp6nlQ80XC3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp6nlQ80XC3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Usp6nlQ80XC3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp6nlQ80XC3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp6nlQ80XC3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Usp6nlQ80XC3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Usp6nlQ80XC3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.54■■□□□ 1.84
Usp6nlQ80XC3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Usp6nlQ80XC3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp6nlQ80XC3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Usp6nlQ80XC3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Usp6nlQ80XC3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp6nlQ80XC3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Usp6nlQ80XC3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Usp6nlQ80XC3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.5■■□□□ 1.83
Usp6nlQ80XC3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Usp6nlQ80XC3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Usp6nlQ80XC3 Scarna2-201ENSMUST00000157560 414 ntBASIC26.49■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms