Protein–RNA interactions for Protein: Q80VG1

Scml4, Sex comb on midleg-like protein 4, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scml4Q80VG1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scml4Q80VG1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.35■□□□□ 0.85
Scml4Q80VG1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Scml4Q80VG1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scml4Q80VG1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scml4Q80VG1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Scml4Q80VG1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Scml4Q80VG1 Gm27322-201ENSMUST00000184007 104 ntBASIC20.34■□□□□ 0.85
Scml4Q80VG1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Scml4Q80VG1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Scml4Q80VG1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.34■□□□□ 0.85
Scml4Q80VG1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Scml4Q80VG1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scml4Q80VG1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.33■□□□□ 0.84
Scml4Q80VG1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Scml4Q80VG1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scml4Q80VG1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Scml4Q80VG1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scml4Q80VG1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scml4Q80VG1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scml4Q80VG1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Scml4Q80VG1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Scml4Q80VG1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scml4Q80VG1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Scml4Q80VG1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scml4Q80VG1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scml4Q80VG1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scml4Q80VG1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scml4Q80VG1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scml4Q80VG1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scml4Q80VG1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.28■□□□□ 0.84
Scml4Q80VG1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scml4Q80VG1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scml4Q80VG1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scml4Q80VG1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scml4Q80VG1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.27■□□□□ 0.84
Scml4Q80VG1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scml4Q80VG1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.26■□□□□ 0.83
Scml4Q80VG1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scml4Q80VG1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Scml4Q80VG1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scml4Q80VG1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scml4Q80VG1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scml4Q80VG1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scml4Q80VG1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scml4Q80VG1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.25■□□□□ 0.83
Scml4Q80VG1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scml4Q80VG1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Scml4Q80VG1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scml4Q80VG1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scml4Q80VG1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scml4Q80VG1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Scml4Q80VG1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scml4Q80VG1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scml4Q80VG1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scml4Q80VG1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scml4Q80VG1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Scml4Q80VG1 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.22■□□□□ 0.83
Scml4Q80VG1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scml4Q80VG1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scml4Q80VG1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scml4Q80VG1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scml4Q80VG1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Scml4Q80VG1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scml4Q80VG1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scml4Q80VG1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scml4Q80VG1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scml4Q80VG1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scml4Q80VG1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scml4Q80VG1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scml4Q80VG1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scml4Q80VG1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scml4Q80VG1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scml4Q80VG1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scml4Q80VG1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Scml4Q80VG1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scml4Q80VG1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Scml4Q80VG1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Scml4Q80VG1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scml4Q80VG1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.14■□□□□ 0.82
Scml4Q80VG1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scml4Q80VG1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.14■□□□□ 0.81
Scml4Q80VG1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scml4Q80VG1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scml4Q80VG1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scml4Q80VG1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scml4Q80VG1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scml4Q80VG1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scml4Q80VG1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scml4Q80VG1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Scml4Q80VG1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Scml4Q80VG1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Scml4Q80VG1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scml4Q80VG1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scml4Q80VG1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scml4Q80VG1 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.1■□□□□ 0.81
Scml4Q80VG1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scml4Q80VG1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scml4Q80VG1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.1■□□□□ 0.81
Scml4Q80VG1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms