Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.85■■□□□ 1.41
Rai1Q61818 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rai1Q61818 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.84■■□□□ 1.41
Rai1Q61818 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rai1Q61818 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.83■■□□□ 1.4
Rai1Q61818 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Rai1Q61818 Particl-201ENSMUST00000205370 1560 ntBASIC23.82■■□□□ 1.4
Rai1Q61818 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rai1Q61818 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rai1Q61818 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.82■■□□□ 1.4
Rai1Q61818 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.82■■□□□ 1.4
Rai1Q61818 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rai1Q61818 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rai1Q61818 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rai1Q61818 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rai1Q61818 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.81■■□□□ 1.4
Rai1Q61818 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rai1Q61818 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rai1Q61818 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rai1Q61818 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Rai1Q61818 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rai1Q61818 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rai1Q61818 Gm6311-201ENSMUST00000073790 878 ntBASIC23.77■■□□□ 1.4
Rai1Q61818 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rai1Q61818 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.77■■□□□ 1.4
Rai1Q61818 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.77■■□□□ 1.4
Rai1Q61818 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.77■■□□□ 1.4
Rai1Q61818 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Rai1Q61818 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rai1Q61818 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rai1Q61818 Cap2-205ENSMUST00000225824 1634 ntBASIC23.76■■□□□ 1.39
Rai1Q61818 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rai1Q61818 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.75■■□□□ 1.39
Rai1Q61818 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rai1Q61818 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rai1Q61818 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rai1Q61818 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rai1Q61818 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.75■■□□□ 1.39
Rai1Q61818 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rai1Q61818 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rai1Q61818 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.73■■□□□ 1.39
Rai1Q61818 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.73■■□□□ 1.39
Rai1Q61818 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rai1Q61818 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Rai1Q61818 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
Rai1Q61818 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rai1Q61818 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Rai1Q61818 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rai1Q61818 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rai1Q61818 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rai1Q61818 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rai1Q61818 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rai1Q61818 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rai1Q61818 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rai1Q61818 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Rai1Q61818 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rai1Q61818 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rai1Q61818 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rai1Q61818 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rai1Q61818 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rai1Q61818 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rai1Q61818 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rai1Q61818 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rai1Q61818 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rai1Q61818 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rai1Q61818 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rai1Q61818 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.62■■□□□ 1.37
Rai1Q61818 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rai1Q61818 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rai1Q61818 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rai1Q61818 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rai1Q61818 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rai1Q61818 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rai1Q61818 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Rai1Q61818 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rai1Q61818 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.58■■□□□ 1.37
Rai1Q61818 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rai1Q61818 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Rai1Q61818 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.58■■□□□ 1.36
Rai1Q61818 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Rai1Q61818 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rai1Q61818 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.56■■□□□ 1.36
Rai1Q61818 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Rai1Q61818 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rai1Q61818 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rai1Q61818 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rai1Q61818 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rai1Q61818 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rai1Q61818 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rai1Q61818 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rai1Q61818 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rai1Q61818 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rai1Q61818 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rai1Q61818 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rai1Q61818 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.52■■□□□ 1.36
Rai1Q61818 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rai1Q61818 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Rai1Q61818 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rai1Q61818 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.49■■□□□ 1.35
Rai1Q61818 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms