Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cfhr1Q61406 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cfhr1Q61406 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cfhr1Q61406 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Cfhr1Q61406 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cfhr1Q61406 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.38■■□□□ 1.01
Cfhr1Q61406 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.38■■□□□ 1.01
Cfhr1Q61406 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cfhr1Q61406 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.37■■□□□ 1.01
Cfhr1Q61406 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.37■■□□□ 1.01
Cfhr1Q61406 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cfhr1Q61406 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Cfhr1Q61406 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cfhr1Q61406 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cfhr1Q61406 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.34■■□□□ 1.01
Cfhr1Q61406 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cfhr1Q61406 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfhr1Q61406 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfhr1Q61406 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cfhr1Q61406 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Cfhr1Q61406 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cfhr1Q61406 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cfhr1Q61406 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cfhr1Q61406 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Cfhr1Q61406 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cfhr1Q61406 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cfhr1Q61406 Particl-201ENSMUST00000205370 1560 ntBASIC21.31■■□□□ 1
Cfhr1Q61406 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cfhr1Q61406 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
Cfhr1Q61406 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cfhr1Q61406 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cfhr1Q61406 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cfhr1Q61406 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.29■■□□□ 1
Cfhr1Q61406 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cfhr1Q61406 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.29■■□□□ 1
Cfhr1Q61406 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cfhr1Q61406 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.29■■□□□ 1
Cfhr1Q61406 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cfhr1Q61406 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cfhr1Q61406 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.28■■□□□ 1
Cfhr1Q61406 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cfhr1Q61406 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cfhr1Q61406 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Cfhr1Q61406 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cfhr1Q61406 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cfhr1Q61406 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cfhr1Q61406 Gm30023-201ENSMUST00000197970 889 ntBASIC21.26■□□□□ 0.99
Cfhr1Q61406 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cfhr1Q61406 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cfhr1Q61406 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.25■□□□□ 0.99
Cfhr1Q61406 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cfhr1Q61406 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cfhr1Q61406 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfhr1Q61406 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfhr1Q61406 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfhr1Q61406 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfhr1Q61406 Zxda-201ENSMUST00000117281 2621 ntBASIC21.23■□□□□ 0.99
Cfhr1Q61406 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cfhr1Q61406 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cfhr1Q61406 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cfhr1Q61406 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.22■□□□□ 0.99
Cfhr1Q61406 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.21■□□□□ 0.99
Cfhr1Q61406 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfhr1Q61406 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfhr1Q61406 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cfhr1Q61406 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfhr1Q61406 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cfhr1Q61406 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfhr1Q61406 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfhr1Q61406 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.2■□□□□ 0.98
Cfhr1Q61406 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfhr1Q61406 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cfhr1Q61406 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfhr1Q61406 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfhr1Q61406 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfhr1Q61406 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cfhr1Q61406 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfhr1Q61406 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
Cfhr1Q61406 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfhr1Q61406 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfhr1Q61406 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.15■□□□□ 0.98
Cfhr1Q61406 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfhr1Q61406 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfhr1Q61406 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfhr1Q61406 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfhr1Q61406 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cfhr1Q61406 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
Cfhr1Q61406 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cfhr1Q61406 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.12■□□□□ 0.97
Cfhr1Q61406 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfhr1Q61406 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfhr1Q61406 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfhr1Q61406 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cfhr1Q61406 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfhr1Q61406 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfhr1Q61406 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfhr1Q61406 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Cfhr1Q61406 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfhr1Q61406 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfhr1Q61406 Scarna2-201ENSMUST00000157560 414 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms