Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Clns1aQ61189 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Clns1aQ61189 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clns1aQ61189 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clns1aQ61189 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clns1aQ61189 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clns1aQ61189 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clns1aQ61189 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clns1aQ61189 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clns1aQ61189 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clns1aQ61189 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clns1aQ61189 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clns1aQ61189 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clns1aQ61189 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clns1aQ61189 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clns1aQ61189 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clns1aQ61189 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clns1aQ61189 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clns1aQ61189 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clns1aQ61189 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clns1aQ61189 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clns1aQ61189 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clns1aQ61189 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.2■□□□□ 0.82
Clns1aQ61189 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clns1aQ61189 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clns1aQ61189 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.2■□□□□ 0.82
Clns1aQ61189 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clns1aQ61189 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clns1aQ61189 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clns1aQ61189 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clns1aQ61189 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clns1aQ61189 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clns1aQ61189 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clns1aQ61189 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clns1aQ61189 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clns1aQ61189 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Clns1aQ61189 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clns1aQ61189 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Clns1aQ61189 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clns1aQ61189 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clns1aQ61189 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clns1aQ61189 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clns1aQ61189 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clns1aQ61189 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Clns1aQ61189 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clns1aQ61189 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clns1aQ61189 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clns1aQ61189 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Clns1aQ61189 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clns1aQ61189 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clns1aQ61189 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.15■□□□□ 0.82
Clns1aQ61189 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clns1aQ61189 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clns1aQ61189 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.12■□□□□ 0.81
Clns1aQ61189 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Clns1aQ61189 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clns1aQ61189 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clns1aQ61189 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clns1aQ61189 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clns1aQ61189 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clns1aQ61189 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clns1aQ61189 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clns1aQ61189 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clns1aQ61189 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clns1aQ61189 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clns1aQ61189 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clns1aQ61189 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.1■□□□□ 0.81
Clns1aQ61189 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clns1aQ61189 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clns1aQ61189 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clns1aQ61189 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Clns1aQ61189 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clns1aQ61189 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clns1aQ61189 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.07■□□□□ 0.8
Clns1aQ61189 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clns1aQ61189 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clns1aQ61189 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Clns1aQ61189 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clns1aQ61189 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clns1aQ61189 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clns1aQ61189 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clns1aQ61189 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clns1aQ61189 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clns1aQ61189 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clns1aQ61189 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clns1aQ61189 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clns1aQ61189 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clns1aQ61189 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clns1aQ61189 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clns1aQ61189 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Clns1aQ61189 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clns1aQ61189 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clns1aQ61189 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clns1aQ61189 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clns1aQ61189 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clns1aQ61189 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Clns1aQ61189 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clns1aQ61189 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clns1aQ61189 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Clns1aQ61189 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms