Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav2Q5R1I9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.1■□□□□ 0.65
Trav2Q5R1I9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav2Q5R1I9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav2Q5R1I9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trav2Q5R1I9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav2Q5R1I9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav2Q5R1I9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav2Q5R1I9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trav2Q5R1I9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav2Q5R1I9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav2Q5R1I9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav2Q5R1I9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.08■□□□□ 0.64
Trav2Q5R1I9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trav2Q5R1I9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav2Q5R1I9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Trav2Q5R1I9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav2Q5R1I9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav2Q5R1I9 Gm11599-201ENSMUST00000118720 878 ntBASIC19.05■□□□□ 0.64
Trav2Q5R1I9 Gm30023-201ENSMUST00000197970 889 ntBASIC19.05■□□□□ 0.64
Trav2Q5R1I9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.05■□□□□ 0.64
Trav2Q5R1I9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav2Q5R1I9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav2Q5R1I9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav2Q5R1I9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav2Q5R1I9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav2Q5R1I9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav2Q5R1I9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav2Q5R1I9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav2Q5R1I9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
Trav2Q5R1I9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav2Q5R1I9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav2Q5R1I9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trav2Q5R1I9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav2Q5R1I9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav2Q5R1I9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav2Q5R1I9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav2Q5R1I9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.99■□□□□ 0.63
Trav2Q5R1I9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav2Q5R1I9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav2Q5R1I9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav2Q5R1I9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav2Q5R1I9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav2Q5R1I9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav2Q5R1I9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.97■□□□□ 0.63
Trav2Q5R1I9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav2Q5R1I9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav2Q5R1I9 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.96■□□□□ 0.63
Trav2Q5R1I9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav2Q5R1I9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav2Q5R1I9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.96■□□□□ 0.63
Trav2Q5R1I9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav2Q5R1I9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav2Q5R1I9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav2Q5R1I9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav2Q5R1I9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav2Q5R1I9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav2Q5R1I9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav2Q5R1I9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav2Q5R1I9 Particl-201ENSMUST00000205370 1560 ntBASIC18.93■□□□□ 0.62
Trav2Q5R1I9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav2Q5R1I9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav2Q5R1I9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav2Q5R1I9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trav2Q5R1I9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav2Q5R1I9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav2Q5R1I9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav2Q5R1I9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav2Q5R1I9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trav2Q5R1I9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav2Q5R1I9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav2Q5R1I9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav2Q5R1I9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav2Q5R1I9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav2Q5R1I9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav2Q5R1I9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav2Q5R1I9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav2Q5R1I9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav2Q5R1I9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav2Q5R1I9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav2Q5R1I9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav2Q5R1I9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav2Q5R1I9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav2Q5R1I9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.85■□□□□ 0.61
Trav2Q5R1I9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav2Q5R1I9 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.84■□□□□ 0.61
Trav2Q5R1I9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trav2Q5R1I9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav2Q5R1I9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trav2Q5R1I9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav2Q5R1I9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav2Q5R1I9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav2Q5R1I9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav2Q5R1I9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav2Q5R1I9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav2Q5R1I9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav2Q5R1I9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Trav2Q5R1I9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav2Q5R1I9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav2Q5R1I9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms