Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.02■■□□□ 1.44
Zfp560Q3URI6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Zfp560Q3URI6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24■■□□□ 1.43
Zfp560Q3URI6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.99■■□□□ 1.43
Zfp560Q3URI6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zfp560Q3URI6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zfp560Q3URI6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.98■■□□□ 1.43
Zfp560Q3URI6 Nkain2-201ENSMUST00000092602 558 ntBASIC23.98■■□□□ 1.43
Zfp560Q3URI6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Zfp560Q3URI6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zfp560Q3URI6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.97■■□□□ 1.43
Zfp560Q3URI6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zfp560Q3URI6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zfp560Q3URI6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.96■■□□□ 1.43
Zfp560Q3URI6 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.96■■□□□ 1.43
Zfp560Q3URI6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Zfp560Q3URI6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zfp560Q3URI6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Zfp560Q3URI6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Zfp560Q3URI6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.95■■□□□ 1.42
Zfp560Q3URI6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Zfp560Q3URI6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Zfp560Q3URI6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zfp560Q3URI6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zfp560Q3URI6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zfp560Q3URI6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Zfp560Q3URI6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
Zfp560Q3URI6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zfp560Q3URI6 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.92■■□□□ 1.42
Zfp560Q3URI6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zfp560Q3URI6 Gm6821-201ENSMUST00000107540 542 ntBASIC23.92■■□□□ 1.42
Zfp560Q3URI6 Gm30023-201ENSMUST00000197970 889 ntBASIC23.91■■□□□ 1.42
Zfp560Q3URI6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
Zfp560Q3URI6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.9■■□□□ 1.42
Zfp560Q3URI6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Zfp560Q3URI6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Zfp560Q3URI6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Zfp560Q3URI6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.88■■□□□ 1.41
Zfp560Q3URI6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Zfp560Q3URI6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Zfp560Q3URI6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Zfp560Q3URI6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Zfp560Q3URI6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Zfp560Q3URI6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Zfp560Q3URI6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Zfp560Q3URI6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Zfp560Q3URI6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Zfp560Q3URI6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Zfp560Q3URI6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Zfp560Q3URI6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Zfp560Q3URI6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Zfp560Q3URI6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Zfp560Q3URI6 Gm8503-201ENSMUST00000118131 455 ntBASIC23.82■■□□□ 1.4
Zfp560Q3URI6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Zfp560Q3URI6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zfp560Q3URI6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zfp560Q3URI6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Zfp560Q3URI6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Zfp560Q3URI6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Zfp560Q3URI6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Zfp560Q3URI6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Zfp560Q3URI6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.78■■□□□ 1.4
Zfp560Q3URI6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.78■■□□□ 1.4
Zfp560Q3URI6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
Zfp560Q3URI6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Zfp560Q3URI6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Zfp560Q3URI6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Zfp560Q3URI6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.77■■□□□ 1.4
Zfp560Q3URI6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
Zfp560Q3URI6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.39
Zfp560Q3URI6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Zfp560Q3URI6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Zfp560Q3URI6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Zfp560Q3URI6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.75■■□□□ 1.39
Zfp560Q3URI6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Zfp560Q3URI6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Zfp560Q3URI6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.75■■□□□ 1.39
Zfp560Q3URI6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.74■■□□□ 1.39
Zfp560Q3URI6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Zfp560Q3URI6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.73■■□□□ 1.39
Zfp560Q3URI6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Zfp560Q3URI6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zfp560Q3URI6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.72■■□□□ 1.39
Zfp560Q3URI6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Zfp560Q3URI6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Zfp560Q3URI6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.7■■□□□ 1.38
Zfp560Q3URI6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.7■■□□□ 1.38
Zfp560Q3URI6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zfp560Q3URI6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.69■■□□□ 1.38
Zfp560Q3URI6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zfp560Q3URI6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.69■■□□□ 1.38
Zfp560Q3URI6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Zfp560Q3URI6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms