Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
Arhgef40Q3UPH7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC36.58■■■■□ 3.45
Arhgef40Q3UPH7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC36.56■■■■□ 3.44
Arhgef40Q3UPH7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Arhgef40Q3UPH7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC36.55■■■■□ 3.44
Arhgef40Q3UPH7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
Arhgef40Q3UPH7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC36.54■■■■□ 3.44
Arhgef40Q3UPH7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Arhgef40Q3UPH7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Arhgef40Q3UPH7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Arhgef40Q3UPH7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Arhgef40Q3UPH7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC36.51■■■■□ 3.44
Arhgef40Q3UPH7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
Arhgef40Q3UPH7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC36.5■■■■□ 3.43
Arhgef40Q3UPH7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Arhgef40Q3UPH7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Arhgef40Q3UPH7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC36.48■■■■□ 3.43
Arhgef40Q3UPH7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC36.48■■■■□ 3.43
Arhgef40Q3UPH7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Arhgef40Q3UPH7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC36.47■■■■□ 3.43
Arhgef40Q3UPH7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC36.46■■■■□ 3.43
Arhgef40Q3UPH7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC36.45■■■■□ 3.43
Arhgef40Q3UPH7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC36.45■■■■□ 3.43
Arhgef40Q3UPH7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Arhgef40Q3UPH7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC36.45■■■■□ 3.43
Arhgef40Q3UPH7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Arhgef40Q3UPH7 Pcf11-205ENSMUST00000208255 1720 ntBASIC36.43■■■■□ 3.42
Arhgef40Q3UPH7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
Arhgef40Q3UPH7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC36.42■■■■□ 3.42
Arhgef40Q3UPH7 Particl-201ENSMUST00000205370 1560 ntBASIC36.4■■■■□ 3.42
Arhgef40Q3UPH7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC36.4■■■■□ 3.42
Arhgef40Q3UPH7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Arhgef40Q3UPH7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Arhgef40Q3UPH7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC36.39■■■■□ 3.42
Arhgef40Q3UPH7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC36.39■■■■□ 3.42
Arhgef40Q3UPH7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC36.38■■■■□ 3.41
Arhgef40Q3UPH7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC36.38■■■■□ 3.41
Arhgef40Q3UPH7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
Arhgef40Q3UPH7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Arhgef40Q3UPH7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC36.36■■■■□ 3.41
Arhgef40Q3UPH7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC36.35■■■■□ 3.41
Arhgef40Q3UPH7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Arhgef40Q3UPH7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC36.34■■■■□ 3.41
Arhgef40Q3UPH7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Arhgef40Q3UPH7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Arhgef40Q3UPH7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC36.33■■■■□ 3.41
Arhgef40Q3UPH7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Arhgef40Q3UPH7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC36.32■■■■□ 3.4
Arhgef40Q3UPH7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Arhgef40Q3UPH7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
Arhgef40Q3UPH7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Arhgef40Q3UPH7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Arhgef40Q3UPH7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC36.27■■■■□ 3.4
Arhgef40Q3UPH7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC36.27■■■■□ 3.4
Arhgef40Q3UPH7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Arhgef40Q3UPH7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC36.26■■■■□ 3.4
Arhgef40Q3UPH7 Gm6311-201ENSMUST00000073790 878 ntBASIC36.26■■■■□ 3.4
Arhgef40Q3UPH7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC36.25■■■■□ 3.39
Arhgef40Q3UPH7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC36.25■■■■□ 3.39
Arhgef40Q3UPH7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC36.25■■■■□ 3.39
Arhgef40Q3UPH7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Arhgef40Q3UPH7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Arhgef40Q3UPH7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC36.22■■■■□ 3.39
Arhgef40Q3UPH7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
Arhgef40Q3UPH7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Arhgef40Q3UPH7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Arhgef40Q3UPH7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
Arhgef40Q3UPH7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Arhgef40Q3UPH7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC36.15■■■■□ 3.38
Arhgef40Q3UPH7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
Arhgef40Q3UPH7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Arhgef40Q3UPH7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.38
Arhgef40Q3UPH7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Arhgef40Q3UPH7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Arhgef40Q3UPH7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Arhgef40Q3UPH7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Arhgef40Q3UPH7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC36.11■■■■□ 3.37
Arhgef40Q3UPH7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC36.1■■■■□ 3.37
Arhgef40Q3UPH7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Arhgef40Q3UPH7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Arhgef40Q3UPH7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
Arhgef40Q3UPH7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC36.08■■■■□ 3.37
Arhgef40Q3UPH7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Arhgef40Q3UPH7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Arhgef40Q3UPH7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Arhgef40Q3UPH7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
Arhgef40Q3UPH7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC36.07■■■■□ 3.36
Arhgef40Q3UPH7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Arhgef40Q3UPH7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Arhgef40Q3UPH7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Arhgef40Q3UPH7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Arhgef40Q3UPH7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC36.05■■■■□ 3.36
Arhgef40Q3UPH7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC36.04■■■■□ 3.36
Arhgef40Q3UPH7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC36.04■■■■□ 3.36
Arhgef40Q3UPH7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC36.03■■■■□ 3.36
Arhgef40Q3UPH7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC36.02■■■■□ 3.36
Arhgef40Q3UPH7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC36.01■■■■□ 3.36
Arhgef40Q3UPH7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC36.01■■■■□ 3.36
Arhgef40Q3UPH7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Arhgef40Q3UPH7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms