Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Khdc4Q3TCX3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Khdc4Q3TCX3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Khdc4Q3TCX3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Khdc4Q3TCX3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Khdc4Q3TCX3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Khdc4Q3TCX3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
Khdc4Q3TCX3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Khdc4Q3TCX3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Khdc4Q3TCX3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Khdc4Q3TCX3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Khdc4Q3TCX3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Khdc4Q3TCX3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Khdc4Q3TCX3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Khdc4Q3TCX3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Khdc4Q3TCX3 Gm11599-201ENSMUST00000118720 878 ntBASIC22.55■■□□□ 1.2
Khdc4Q3TCX3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Khdc4Q3TCX3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Khdc4Q3TCX3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Khdc4Q3TCX3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
Khdc4Q3TCX3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Khdc4Q3TCX3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.53■■□□□ 1.2
Khdc4Q3TCX3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.53■■□□□ 1.2
Khdc4Q3TCX3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Khdc4Q3TCX3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.52■■□□□ 1.2
Khdc4Q3TCX3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.52■■□□□ 1.2
Khdc4Q3TCX3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.52■■□□□ 1.2
Khdc4Q3TCX3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Khdc4Q3TCX3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Khdc4Q3TCX3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Khdc4Q3TCX3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Khdc4Q3TCX3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Khdc4Q3TCX3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.5■■□□□ 1.19
Khdc4Q3TCX3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Khdc4Q3TCX3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Khdc4Q3TCX3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.48■■□□□ 1.19
Khdc4Q3TCX3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.47■■□□□ 1.19
Khdc4Q3TCX3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.47■■□□□ 1.19
Khdc4Q3TCX3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Khdc4Q3TCX3 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.46■■□□□ 1.19
Khdc4Q3TCX3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Khdc4Q3TCX3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Khdc4Q3TCX3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Khdc4Q3TCX3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.45■■□□□ 1.18
Khdc4Q3TCX3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Khdc4Q3TCX3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.44■■□□□ 1.18
Khdc4Q3TCX3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.44■■□□□ 1.18
Khdc4Q3TCX3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Khdc4Q3TCX3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Khdc4Q3TCX3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Khdc4Q3TCX3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Khdc4Q3TCX3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.42■■□□□ 1.18
Khdc4Q3TCX3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Khdc4Q3TCX3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Khdc4Q3TCX3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Khdc4Q3TCX3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
Khdc4Q3TCX3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Khdc4Q3TCX3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Khdc4Q3TCX3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.4■■□□□ 1.18
Khdc4Q3TCX3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Khdc4Q3TCX3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Khdc4Q3TCX3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Khdc4Q3TCX3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Khdc4Q3TCX3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Khdc4Q3TCX3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Khdc4Q3TCX3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Khdc4Q3TCX3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Khdc4Q3TCX3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.38■■□□□ 1.17
Khdc4Q3TCX3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Khdc4Q3TCX3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Khdc4Q3TCX3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Khdc4Q3TCX3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Khdc4Q3TCX3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Khdc4Q3TCX3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Khdc4Q3TCX3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.37■■□□□ 1.17
Khdc4Q3TCX3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Khdc4Q3TCX3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Khdc4Q3TCX3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.37■■□□□ 1.17
Khdc4Q3TCX3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Khdc4Q3TCX3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Khdc4Q3TCX3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Khdc4Q3TCX3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.35■■□□□ 1.17
Khdc4Q3TCX3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Khdc4Q3TCX3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.34■■□□□ 1.17
Khdc4Q3TCX3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Khdc4Q3TCX3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Khdc4Q3TCX3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Khdc4Q3TCX3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Khdc4Q3TCX3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.33■■□□□ 1.17
Khdc4Q3TCX3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Khdc4Q3TCX3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.32■■□□□ 1.16
Khdc4Q3TCX3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Khdc4Q3TCX3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Khdc4Q3TCX3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Khdc4Q3TCX3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Khdc4Q3TCX3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Khdc4Q3TCX3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Khdc4Q3TCX3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.3■■□□□ 1.16
Khdc4Q3TCX3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Khdc4Q3TCX3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms