Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SgcbP82349 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SgcbP82349 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SgcbP82349 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SgcbP82349 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.33■■□□□ 1.01
SgcbP82349 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SgcbP82349 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.33■■□□□ 1.01
SgcbP82349 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SgcbP82349 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SgcbP82349 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SgcbP82349 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SgcbP82349 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SgcbP82349 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SgcbP82349 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.3■■□□□ 1
SgcbP82349 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
SgcbP82349 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.3■■□□□ 1
SgcbP82349 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.3■■□□□ 1
SgcbP82349 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.29■■□□□ 1
SgcbP82349 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SgcbP82349 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.29■■□□□ 1
SgcbP82349 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.29■■□□□ 1
SgcbP82349 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.28■■□□□ 1
SgcbP82349 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SgcbP82349 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SgcbP82349 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SgcbP82349 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SgcbP82349 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SgcbP82349 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SgcbP82349 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.25■□□□□ 0.99
SgcbP82349 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.24■□□□□ 0.99
SgcbP82349 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SgcbP82349 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcbP82349 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SgcbP82349 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcbP82349 Gm30023-201ENSMUST00000197970 889 ntBASIC21.22■□□□□ 0.99
SgcbP82349 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SgcbP82349 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SgcbP82349 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SgcbP82349 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SgcbP82349 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SgcbP82349 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.19■□□□□ 0.98
SgcbP82349 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgcbP82349 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgcbP82349 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgcbP82349 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
SgcbP82349 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcbP82349 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcbP82349 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.16■□□□□ 0.98
SgcbP82349 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SgcbP82349 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SgcbP82349 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcbP82349 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SgcbP82349 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SgcbP82349 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SgcbP82349 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.14■□□□□ 0.98
SgcbP82349 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SgcbP82349 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SgcbP82349 Amer2-203ENSMUST00000225247 2662 ntBASIC21.14■□□□□ 0.97
SgcbP82349 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SgcbP82349 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SgcbP82349 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SgcbP82349 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SgcbP82349 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SgcbP82349 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
SgcbP82349 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SgcbP82349 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SgcbP82349 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgcbP82349 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
SgcbP82349 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgcbP82349 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SgcbP82349 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SgcbP82349 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.1■□□□□ 0.97
SgcbP82349 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SgcbP82349 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.1■□□□□ 0.97
SgcbP82349 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.1■□□□□ 0.97
SgcbP82349 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SgcbP82349 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SgcbP82349 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.08■□□□□ 0.97
SgcbP82349 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.08■□□□□ 0.96
SgcbP82349 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SgcbP82349 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcbP82349 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SgcbP82349 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcbP82349 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.06■□□□□ 0.96
SgcbP82349 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SgcbP82349 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SgcbP82349 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SgcbP82349 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.05■□□□□ 0.96
SgcbP82349 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.05■□□□□ 0.96
SgcbP82349 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SgcbP82349 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcbP82349 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcbP82349 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcbP82349 Gm7432-201ENSMUST00000210343 879 ntBASIC21.03■□□□□ 0.96
SgcbP82349 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcbP82349 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcbP82349 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SgcbP82349 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcbP82349 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SgcbP82349 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms