Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm6P62313 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Lsm6P62313 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Lsm6P62313 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lsm6P62313 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Lsm6P62313 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm6P62313 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm6P62313 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Lsm6P62313 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm6P62313 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.94■□□□□ 0.94
Lsm6P62313 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm6P62313 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm6P62313 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lsm6P62313 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm6P62313 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm6P62313 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Lsm6P62313 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm6P62313 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Lsm6P62313 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Lsm6P62313 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.89■□□□□ 0.93
Lsm6P62313 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lsm6P62313 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm6P62313 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm6P62313 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm6P62313 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Lsm6P62313 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm6P62313 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.86■□□□□ 0.93
Lsm6P62313 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lsm6P62313 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm6P62313 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Lsm6P62313 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.84■□□□□ 0.93
Lsm6P62313 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Lsm6P62313 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm6P62313 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Lsm6P62313 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm6P62313 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm6P62313 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lsm6P62313 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm6P62313 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Lsm6P62313 Gm30023-201ENSMUST00000197970 889 ntBASIC20.81■□□□□ 0.92
Lsm6P62313 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.81■□□□□ 0.92
Lsm6P62313 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm6P62313 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lsm6P62313 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm6P62313 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm6P62313 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm6P62313 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm6P62313 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm6P62313 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm6P62313 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.78■□□□□ 0.92
Lsm6P62313 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm6P62313 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm6P62313 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm6P62313 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Lsm6P62313 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm6P62313 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm6P62313 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm6P62313 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm6P62313 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lsm6P62313 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm6P62313 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm6P62313 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.74■□□□□ 0.91
Lsm6P62313 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm6P62313 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
Lsm6P62313 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm6P62313 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm6P62313 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
Lsm6P62313 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.71■□□□□ 0.91
Lsm6P62313 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.71■□□□□ 0.91
Lsm6P62313 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm6P62313 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm6P62313 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm6P62313 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Lsm6P62313 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.7■□□□□ 0.9
Lsm6P62313 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Lsm6P62313 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm6P62313 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm6P62313 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms