Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rpl27P61358 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rpl27P61358 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Rpl27P61358 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rpl27P61358 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpl27P61358 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpl27P61358 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpl27P61358 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpl27P61358 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpl27P61358 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Rpl27P61358 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rpl27P61358 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpl27P61358 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rpl27P61358 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rpl27P61358 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rpl27P61358 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpl27P61358 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Rpl27P61358 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rpl27P61358 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Rpl27P61358 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rpl27P61358 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rpl27P61358 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl27P61358 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl27P61358 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Rpl27P61358 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl27P61358 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl27P61358 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpl27P61358 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rpl27P61358 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpl27P61358 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rpl27P61358 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rpl27P61358 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Rpl27P61358 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rpl27P61358 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
Rpl27P61358 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpl27P61358 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl27P61358 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl27P61358 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.22■□□□□ 0.99
Rpl27P61358 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl27P61358 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl27P61358 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl27P61358 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl27P61358 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl27P61358 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl27P61358 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl27P61358 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl27P61358 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.2■□□□□ 0.98
Rpl27P61358 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Rpl27P61358 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpl27P61358 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpl27P61358 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpl27P61358 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpl27P61358 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl27P61358 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl27P61358 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl27P61358 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl27P61358 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpl27P61358 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.16■□□□□ 0.98
Rpl27P61358 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.16■□□□□ 0.98
Rpl27P61358 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpl27P61358 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl27P61358 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl27P61358 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.15■□□□□ 0.98
Rpl27P61358 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpl27P61358 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl27P61358 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rpl27P61358 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpl27P61358 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl27P61358 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rpl27P61358 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl27P61358 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl27P61358 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.13■□□□□ 0.97
Rpl27P61358 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl27P61358 Gm30023-201ENSMUST00000197970 889 ntBASIC21.12■□□□□ 0.97
Rpl27P61358 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl27P61358 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl27P61358 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl27P61358 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rpl27P61358 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.11■□□□□ 0.97
Rpl27P61358 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl27P61358 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rpl27P61358 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl27P61358 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl27P61358 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rpl27P61358 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl27P61358 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl27P61358 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl27P61358 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rpl27P61358 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl27P61358 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Rpl27P61358 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rpl27P61358 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl27P61358 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rpl27P61358 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl27P61358 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rpl27P61358 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpl27P61358 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpl27P61358 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Rpl27P61358 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl27P61358 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms