Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Hmgcs2P54869 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Hmgcs2P54869 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Hmgcs2P54869 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Hmgcs2P54869 Gm6311-201ENSMUST00000073790 878 ntBASIC27.27■■□□□ 1.96
Hmgcs2P54869 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.26■■□□□ 1.95
Hmgcs2P54869 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.26■■□□□ 1.95
Hmgcs2P54869 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Hmgcs2P54869 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.25■■□□□ 1.95
Hmgcs2P54869 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Hmgcs2P54869 Particl-201ENSMUST00000205370 1560 ntBASIC27.25■■□□□ 1.95
Hmgcs2P54869 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.25■■□□□ 1.95
Hmgcs2P54869 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Hmgcs2P54869 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Hmgcs2P54869 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Hmgcs2P54869 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Hmgcs2P54869 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Hmgcs2P54869 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Hmgcs2P54869 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Hmgcs2P54869 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Hmgcs2P54869 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Hmgcs2P54869 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Hmgcs2P54869 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.18■■□□□ 1.94
Hmgcs2P54869 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Hmgcs2P54869 Cap2-205ENSMUST00000225824 1634 ntBASIC27.16■■□□□ 1.94
Hmgcs2P54869 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.16■■□□□ 1.94
Hmgcs2P54869 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.16■■□□□ 1.94
Hmgcs2P54869 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Hmgcs2P54869 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Hmgcs2P54869 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.15■■□□□ 1.94
Hmgcs2P54869 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Hmgcs2P54869 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.15■■□□□ 1.94
Hmgcs2P54869 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Hmgcs2P54869 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Hmgcs2P54869 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Hmgcs2P54869 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Hmgcs2P54869 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Hmgcs2P54869 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hmgcs2P54869 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.11■■□□□ 1.93
Hmgcs2P54869 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hmgcs2P54869 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hmgcs2P54869 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hmgcs2P54869 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Hmgcs2P54869 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hmgcs2P54869 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Hmgcs2P54869 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Hmgcs2P54869 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hmgcs2P54869 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Hmgcs2P54869 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.08■■□□□ 1.93
Hmgcs2P54869 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Hmgcs2P54869 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Hmgcs2P54869 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hmgcs2P54869 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Hmgcs2P54869 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Hmgcs2P54869 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Hmgcs2P54869 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Hmgcs2P54869 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hmgcs2P54869 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Hmgcs2P54869 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Hmgcs2P54869 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Hmgcs2P54869 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Hmgcs2P54869 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Hmgcs2P54869 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Hmgcs2P54869 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hmgcs2P54869 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hmgcs2P54869 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Hmgcs2P54869 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Hmgcs2P54869 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Hmgcs2P54869 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Hmgcs2P54869 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Hmgcs2P54869 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Hmgcs2P54869 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Hmgcs2P54869 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Hmgcs2P54869 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.95■■□□□ 1.9
Hmgcs2P54869 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.95■■□□□ 1.9
Hmgcs2P54869 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Hmgcs2P54869 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Hmgcs2P54869 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Hmgcs2P54869 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Hmgcs2P54869 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Hmgcs2P54869 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Hmgcs2P54869 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Hmgcs2P54869 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Hmgcs2P54869 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Hmgcs2P54869 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Hmgcs2P54869 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.9■■□□□ 1.9
Hmgcs2P54869 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.89■■□□□ 1.9
Hmgcs2P54869 Scarna2-201ENSMUST00000157560 414 ntBASIC26.89■■□□□ 1.9
Hmgcs2P54869 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.89■■□□□ 1.9
Hmgcs2P54869 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Hmgcs2P54869 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Hmgcs2P54869 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Hmgcs2P54869 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Hmgcs2P54869 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Hmgcs2P54869 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.87■■□□□ 1.89
Hmgcs2P54869 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Hmgcs2P54869 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.86■■□□□ 1.89
Hmgcs2P54869 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Hmgcs2P54869 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Hmgcs2P54869 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms