Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Atp6v1aP50516 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Atp6v1aP50516 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.33■■■□□ 2.29
Atp6v1aP50516 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Atp6v1aP50516 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Atp6v1aP50516 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Atp6v1aP50516 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Atp6v1aP50516 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.31■■■□□ 2.28
Atp6v1aP50516 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
Atp6v1aP50516 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Atp6v1aP50516 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.3■■■□□ 2.28
Atp6v1aP50516 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Atp6v1aP50516 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
Atp6v1aP50516 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
Atp6v1aP50516 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Atp6v1aP50516 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
Atp6v1aP50516 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
Atp6v1aP50516 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Atp6v1aP50516 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.28
Atp6v1aP50516 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC29.26■■■□□ 2.27
Atp6v1aP50516 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Atp6v1aP50516 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.23■■■□□ 2.27
Atp6v1aP50516 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC29.22■■■□□ 2.27
Atp6v1aP50516 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Atp6v1aP50516 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Atp6v1aP50516 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Atp6v1aP50516 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Atp6v1aP50516 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Atp6v1aP50516 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Atp6v1aP50516 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Atp6v1aP50516 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC29.19■■■□□ 2.26
Atp6v1aP50516 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Atp6v1aP50516 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
Atp6v1aP50516 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Atp6v1aP50516 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Atp6v1aP50516 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC29.17■■■□□ 2.26
Atp6v1aP50516 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Atp6v1aP50516 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Atp6v1aP50516 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Atp6v1aP50516 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Atp6v1aP50516 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Atp6v1aP50516 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Atp6v1aP50516 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Atp6v1aP50516 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Atp6v1aP50516 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Atp6v1aP50516 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.11■■■□□ 2.25
Atp6v1aP50516 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC29.11■■■□□ 2.25
Atp6v1aP50516 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Atp6v1aP50516 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.11■■■□□ 2.25
Atp6v1aP50516 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Atp6v1aP50516 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Atp6v1aP50516 Scarna2-201ENSMUST00000157560 414 ntBASIC29.09■■■□□ 2.25
Atp6v1aP50516 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Atp6v1aP50516 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Atp6v1aP50516 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Atp6v1aP50516 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
Atp6v1aP50516 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
Atp6v1aP50516 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.06■■■□□ 2.24
Atp6v1aP50516 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Atp6v1aP50516 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Atp6v1aP50516 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29.05■■■□□ 2.24
Atp6v1aP50516 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Atp6v1aP50516 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Atp6v1aP50516 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Atp6v1aP50516 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Atp6v1aP50516 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Atp6v1aP50516 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
Atp6v1aP50516 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Atp6v1aP50516 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Atp6v1aP50516 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.01■■■□□ 2.23
Atp6v1aP50516 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Atp6v1aP50516 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Atp6v1aP50516 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Atp6v1aP50516 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC29■■■□□ 2.23
Atp6v1aP50516 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Atp6v1aP50516 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
Atp6v1aP50516 Gm11687-201ENSMUST00000118911 886 ntBASIC28.99■■■□□ 2.23
Atp6v1aP50516 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Atp6v1aP50516 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Atp6v1aP50516 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Atp6v1aP50516 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Atp6v1aP50516 Gm9806-201ENSMUST00000051080 552 ntBASIC28.98■■■□□ 2.23
Atp6v1aP50516 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Atp6v1aP50516 Gm16437-201ENSMUST00000025669 507 ntBASIC28.95■■■□□ 2.22
Atp6v1aP50516 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.94■■■□□ 2.22
Atp6v1aP50516 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.94■■■□□ 2.22
Atp6v1aP50516 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.94■■■□□ 2.22
Atp6v1aP50516 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Atp6v1aP50516 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Atp6v1aP50516 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Atp6v1aP50516 Gm4799-201ENSMUST00000095396 657 ntBASIC28.93■■■□□ 2.22
Atp6v1aP50516 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Atp6v1aP50516 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Atp6v1aP50516 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Atp6v1aP50516 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.92■■■□□ 2.22
Atp6v1aP50516 Gm12366-201ENSMUST00000121722 873 ntBASIC28.92■■■□□ 2.22
Atp6v1aP50516 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.92■■■□□ 2.22
Atp6v1aP50516 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Atp6v1aP50516 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.92■■■□□ 2.22
Atp6v1aP50516 Gm5786-201ENSMUST00000085368 882 ntBASIC28.92■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms