Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GdnfP48540 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GdnfP48540 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GdnfP48540 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GdnfP48540 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GdnfP48540 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GdnfP48540 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GdnfP48540 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.67■□□□□ 0.9
GdnfP48540 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GdnfP48540 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GdnfP48540 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GdnfP48540 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GdnfP48540 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GdnfP48540 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
GdnfP48540 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
GdnfP48540 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GdnfP48540 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GdnfP48540 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GdnfP48540 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GdnfP48540 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GdnfP48540 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GdnfP48540 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GdnfP48540 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GdnfP48540 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GdnfP48540 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GdnfP48540 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GdnfP48540 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.6■□□□□ 0.89
GdnfP48540 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GdnfP48540 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GdnfP48540 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GdnfP48540 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.59■□□□□ 0.89
GdnfP48540 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GdnfP48540 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GdnfP48540 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GdnfP48540 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.58■□□□□ 0.89
GdnfP48540 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
GdnfP48540 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
GdnfP48540 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GdnfP48540 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
GdnfP48540 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GdnfP48540 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GdnfP48540 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GdnfP48540 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GdnfP48540 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.56■□□□□ 0.88
GdnfP48540 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GdnfP48540 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GdnfP48540 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GdnfP48540 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.55■□□□□ 0.88
GdnfP48540 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GdnfP48540 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.55■□□□□ 0.88
GdnfP48540 Gm9397-201ENSMUST00000200125 605 ntBASIC20.55■□□□□ 0.88
GdnfP48540 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
GdnfP48540 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GdnfP48540 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GdnfP48540 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
GdnfP48540 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GdnfP48540 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GdnfP48540 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GdnfP48540 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.53■□□□□ 0.88
GdnfP48540 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GdnfP48540 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.52■□□□□ 0.88
GdnfP48540 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GdnfP48540 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GdnfP48540 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GdnfP48540 Gm45855-201ENSMUST00000212546 880 ntBASIC20.49■□□□□ 0.87
GdnfP48540 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.48■□□□□ 0.87
GdnfP48540 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GdnfP48540 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GdnfP48540 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GdnfP48540 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GdnfP48540 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GdnfP48540 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GdnfP48540 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GdnfP48540 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.46■□□□□ 0.87
GdnfP48540 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GdnfP48540 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
GdnfP48540 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GdnfP48540 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.45■□□□□ 0.86
GdnfP48540 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GdnfP48540 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GdnfP48540 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.43■□□□□ 0.86
GdnfP48540 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GdnfP48540 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GdnfP48540 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GdnfP48540 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GdnfP48540 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GdnfP48540 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GdnfP48540 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GdnfP48540 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GdnfP48540 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.42■□□□□ 0.86
GdnfP48540 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GdnfP48540 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GdnfP48540 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.41■□□□□ 0.86
GdnfP48540 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.41■□□□□ 0.86
GdnfP48540 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GdnfP48540 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GdnfP48540 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GdnfP48540 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GdnfP48540 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GdnfP48540 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms