Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TgfaP48030 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TgfaP48030 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TgfaP48030 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.12■□□□□ 0.97
TgfaP48030 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TgfaP48030 Gm30023-201ENSMUST00000197970 889 ntBASIC21.12■□□□□ 0.97
TgfaP48030 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TgfaP48030 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TgfaP48030 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TgfaP48030 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TgfaP48030 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TgfaP48030 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TgfaP48030 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TgfaP48030 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TgfaP48030 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TgfaP48030 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TgfaP48030 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TgfaP48030 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TgfaP48030 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TgfaP48030 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TgfaP48030 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TgfaP48030 Scarna2-201ENSMUST00000157560 414 ntBASIC21.07■□□□□ 0.96
TgfaP48030 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TgfaP48030 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TgfaP48030 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
TgfaP48030 Gm11687-201ENSMUST00000118911 886 ntBASIC21.06■□□□□ 0.96
TgfaP48030 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TgfaP48030 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TgfaP48030 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TgfaP48030 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
TgfaP48030 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TgfaP48030 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TgfaP48030 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TgfaP48030 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TgfaP48030 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TgfaP48030 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TgfaP48030 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TgfaP48030 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TgfaP48030 Gm9806-201ENSMUST00000051080 552 ntBASIC21.01■□□□□ 0.95
TgfaP48030 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TgfaP48030 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TgfaP48030 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TgfaP48030 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TgfaP48030 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21■□□□□ 0.95
TgfaP48030 Pcf11-205ENSMUST00000208255 1720 ntBASIC21■□□□□ 0.95
TgfaP48030 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TgfaP48030 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.99■□□□□ 0.95
TgfaP48030 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TgfaP48030 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.98■□□□□ 0.95
TgfaP48030 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TgfaP48030 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TgfaP48030 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TgfaP48030 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.96■□□□□ 0.95
TgfaP48030 Gm12366-201ENSMUST00000121722 873 ntBASIC20.96■□□□□ 0.95
TgfaP48030 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.96■□□□□ 0.95
TgfaP48030 Gm16437-201ENSMUST00000025669 507 ntBASIC20.96■□□□□ 0.95
TgfaP48030 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TgfaP48030 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TgfaP48030 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.96■□□□□ 0.95
TgfaP48030 Gm5786-201ENSMUST00000085368 882 ntBASIC20.96■□□□□ 0.95
TgfaP48030 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.95■□□□□ 0.94
TgfaP48030 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TgfaP48030 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.94■□□□□ 0.94
TgfaP48030 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TgfaP48030 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TgfaP48030 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TgfaP48030 Gm4799-201ENSMUST00000095396 657 ntBASIC20.94■□□□□ 0.94
TgfaP48030 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.94■□□□□ 0.94
TgfaP48030 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TgfaP48030 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TgfaP48030 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.93■□□□□ 0.94
TgfaP48030 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TgfaP48030 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TgfaP48030 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.91■□□□□ 0.94
TgfaP48030 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TgfaP48030 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TgfaP48030 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TgfaP48030 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TgfaP48030 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TgfaP48030 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TgfaP48030 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TgfaP48030 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TgfaP48030 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.88■□□□□ 0.93
TgfaP48030 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TgfaP48030 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.87■□□□□ 0.93
TgfaP48030 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TgfaP48030 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TgfaP48030 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TgfaP48030 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TgfaP48030 Mir3960-201ENSMUST00000198213 73 ntBASIC20.86■□□□□ 0.93
TgfaP48030 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TgfaP48030 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TgfaP48030 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TgfaP48030 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TgfaP48030 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TgfaP48030 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TgfaP48030 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TgfaP48030 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TgfaP48030 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TgfaP48030 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms