Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.71■□□□□ 0.75
Abca1P41233 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abca1P41233 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abca1P41233 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca1P41233 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca1P41233 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.7■□□□□ 0.74
Abca1P41233 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca1P41233 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca1P41233 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca1P41233 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca1P41233 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca1P41233 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.68■□□□□ 0.74
Abca1P41233 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca1P41233 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Abca1P41233 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Abca1P41233 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.68■□□□□ 0.74
Abca1P41233 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca1P41233 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.67■□□□□ 0.74
Abca1P41233 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca1P41233 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abca1P41233 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abca1P41233 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Abca1P41233 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Abca1P41233 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Abca1P41233 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Abca1P41233 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abca1P41233 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abca1P41233 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca1P41233 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.65■□□□□ 0.74
Abca1P41233 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.65■□□□□ 0.74
Abca1P41233 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Abca1P41233 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abca1P41233 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Abca1P41233 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Abca1P41233 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Abca1P41233 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abca1P41233 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Abca1P41233 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Abca1P41233 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.63■□□□□ 0.73
Abca1P41233 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Abca1P41233 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca1P41233 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca1P41233 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Abca1P41233 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca1P41233 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca1P41233 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Abca1P41233 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Abca1P41233 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Abca1P41233 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abca1P41233 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abca1P41233 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abca1P41233 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.6■□□□□ 0.73
Abca1P41233 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abca1P41233 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Abca1P41233 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Abca1P41233 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abca1P41233 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abca1P41233 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.57■□□□□ 0.72
Abca1P41233 Gm12366-201ENSMUST00000121722 873 ntBASIC19.57■□□□□ 0.72
Abca1P41233 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.57■□□□□ 0.72
Abca1P41233 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Abca1P41233 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.57■□□□□ 0.72
Abca1P41233 Gm5786-201ENSMUST00000085368 882 ntBASIC19.57■□□□□ 0.72
Abca1P41233 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Abca1P41233 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abca1P41233 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Abca1P41233 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abca1P41233 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abca1P41233 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abca1P41233 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Abca1P41233 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Abca1P41233 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abca1P41233 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Abca1P41233 Particl-201ENSMUST00000205370 1560 ntBASIC19.53■□□□□ 0.72
Abca1P41233 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Abca1P41233 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Abca1P41233 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Abca1P41233 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abca1P41233 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abca1P41233 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abca1P41233 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abca1P41233 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Abca1P41233 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.48■□□□□ 0.71
Abca1P41233 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abca1P41233 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Abca1P41233 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abca1P41233 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abca1P41233 Zxda-201ENSMUST00000117281 2621 ntBASIC19.47■□□□□ 0.71
Abca1P41233 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.47■□□□□ 0.71
Abca1P41233 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abca1P41233 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abca1P41233 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.46■□□□□ 0.71
Abca1P41233 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Abca1P41233 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Abca1P41233 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abca1P41233 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Abca1P41233 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.44■□□□□ 0.7
Abca1P41233 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abca1P41233 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abca1P41233 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms