Protein–RNA interactions for Protein: P40079

LCP5, U3 small nucleolar ribonucleoprotein protein LCP5, yeastyeast

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCP5P40079 STP3YLR375W 1032 nt8.69□□□□□ -1.02
LCP5P40079 SDS24YBR214W 1584 nt8.69□□□□□ -1.02
LCP5P40079 tD(GUC)BtD(GUC)B 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)DtD(GUC)D 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)G1tD(GUC)G1 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)G2tD(GUC)G2 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)I1tD(GUC)I1 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)I2tD(GUC)I2 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)J1tD(GUC)J1 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)J2tD(GUC)J2 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)J3tD(GUC)J3 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)J4tD(GUC)J4 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)KtD(GUC)K 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)L1tD(GUC)L1 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)L2tD(GUC)L2 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)MtD(GUC)M 72 nt8.68□□□□□ -1.02
LCP5P40079 tD(GUC)OtD(GUC)O 72 nt8.68□□□□□ -1.02
LCP5P40079 EMC3YKL207W 762 nt8.68□□□□□ -1.02
LCP5P40079 MRS4YKR052C 915 nt8.68□□□□□ -1.02
LCP5P40079 ADH3YMR083W 1128 nt8.68□□□□□ -1.02
LCP5P40079 HXT11YOL156W 1704 nt8.68□□□□□ -1.02
LCP5P40079 NPP1YCR026C 2229 nt8.68□□□□□ -1.02
LCP5P40079 VBA3YCL069W 1377 nt8.67□□□□□ -1.02
LCP5P40079 YRF1-2YER190W 5046 nt8.67□□□□□ -1.02
LCP5P40079 tS(GCU)LtS(GCU)L 80 nt8.67□□□□□ -1.02
LCP5P40079 YPT11YNL304W 1254 nt8.67□□□□□ -1.02
LCP5P40079 AAC3YBR085W 924 nt8.67□□□□□ -1.02
LCP5P40079 YOR072WYOR072W 315 nt8.66□□□□□ -1.02
LCP5P40079 HMG2YLR450W 3138 nt8.66□□□□□ -1.02
LCP5P40079 TPN1YGL186C 1740 nt8.66□□□□□ -1.02
LCP5P40079 ALD5YER073W 1563 nt8.65□□□□□ -1.02
LCP5P40079 PAR32YDL173W 888 nt8.65□□□□□ -1.02
LCP5P40079 YBR232CYBR232C 360 nt8.64□□□□□ -1.03
LCP5P40079 YLR072WYLR072W 2082 nt8.64□□□□□ -1.03
LCP5P40079 HXK1YFR053C 1458 nt8.64□□□□□ -1.03
LCP5P40079 MOB1YIL106W 945 nt8.63□□□□□ -1.03
LCP5P40079 SRM1YGL097W 1449 nt8.63□□□□□ -1.03
LCP5P40079 MIM1YOL026C 342 nt8.62□□□□□ -1.03
LCP5P40079 snR86snR86 1004 nt8.61□□□□□ -1.03
LCP5P40079 tA(AGC)DtA(AGC)D 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)FtA(AGC)F 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)GtA(AGC)G 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)HtA(AGC)H 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)JtA(AGC)J 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)K1tA(AGC)K1 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)K2tA(AGC)K2 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)LtA(AGC)L 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)M1tA(AGC)M1 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)M2tA(AGC)M2 73 nt8.59□□□□□ -1.03
LCP5P40079 tA(AGC)PtA(AGC)P 73 nt8.59□□□□□ -1.03
LCP5P40079 TMS1YDR105C 1422 nt8.59□□□□□ -1.03
LCP5P40079 ENO1YGR254W 1314 nt8.58□□□□□ -1.04
LCP5P40079 HBS1YKR084C 1836 nt8.57□□□□□ -1.04
LCP5P40079 FLX1YIL134W 936 nt8.57□□□□□ -1.04
LCP5P40079 RSM7YJR113C 744 nt8.57□□□□□ -1.04
LCP5P40079 MEX67YPL169C 1800 nt8.57□□□□□ -1.04
LCP5P40079 LYS20YDL182W 1287 nt8.56□□□□□ -1.04
LCP5P40079 YFR020WYFR020W 699 nt8.56□□□□□ -1.04
LCP5P40079 YJL009WYJL009W 327 nt8.56□□□□□ -1.04
LCP5P40079 IPL1YPL209C 1104 nt8.56□□□□□ -1.04
LCP5P40079 GID7YCL039W 2238 nt8.56□□□□□ -1.04
LCP5P40079 MEP1YGR121C 1479 nt8.55□□□□□ -1.04
LCP5P40079 YMR210WYMR210W 1350 nt8.54□□□□□ -1.04
LCP5P40079 YJR149WYJR149W 1215 nt8.54□□□□□ -1.04
LCP5P40079 DUR3YHL016C 2208 nt8.54□□□□□ -1.04
LCP5P40079 ABP1YCR088W 1779 nt8.53□□□□□ -1.04
LCP5P40079 FTH1YBR207W 1398 nt8.53□□□□□ -1.04
LCP5P40079 LEA1YPL213W 717 nt8.53□□□□□ -1.04
LCP5P40079 YBR056WYBR056W 1506 nt8.53□□□□□ -1.04
LCP5P40079 ORT1YOR130C 879 nt8.51□□□□□ -1.05
LCP5P40079 YIR035CYIR035C 765 nt8.5□□□□□ -1.05
LCP5P40079 CYC3YAL039C 810 nt8.49□□□□□ -1.05
LCP5P40079 YLR280CYLR280C 351 nt8.49□□□□□ -1.05
LCP5P40079 BUB2YMR055C 921 nt8.48□□□□□ -1.05
LCP5P40079 HIS3YOR202W 663 nt8.48□□□□□ -1.05
LCP5P40079 SEN2YLR105C 1134 nt8.47□□□□□ -1.05
LCP5P40079 snR4snR4 186 nt8.47□□□□□ -1.05
LCP5P40079 BSP1YPR171W 1731 nt8.46□□□□□ -1.05
LCP5P40079 YJL064WYJL064W 396 nt8.46□□□□□ -1.06
LCP5P40079 SRP102YKL154W 735 nt8.46□□□□□ -1.06
LCP5P40079 ERO1YML130C 1692 nt8.45□□□□□ -1.06
LCP5P40079 YCR025CYCR025C 411 nt8.44□□□□□ -1.06
LCP5P40079 YLR460CYLR460C 1131 nt8.44□□□□□ -1.06
LCP5P40079 URA8YJR103W 1737 nt8.43□□□□□ -1.06
LCP5P40079 RNA170RNA170 169 nt8.43□□□□□ -1.06
LCP5P40079 MET22YOL064C 1074 nt8.43□□□□□ -1.06
LCP5P40079 INO1YJL153C 1602 nt8.41□□□□□ -1.06
LCP5P40079 SER2YGR208W 930 nt8.4□□□□□ -1.06
LCP5P40079 CHS7YHR142W 951 nt8.39□□□□□ -1.07
LCP5P40079 PAU19YMR325W 375 nt8.39□□□□□ -1.07
LCP5P40079 DUS3YLR401C 2007 nt8.39□□□□□ -1.07
LCP5P40079 LRO1YNR008W 1986 nt8.38□□□□□ -1.07
LCP5P40079 EHT1YBR177C 1356 nt8.37□□□□□ -1.07
LCP5P40079 BUD31YCR063W 474 nt8.37□□□□□ -1.07
LCP5P40079 OLA1YBR025C 1185 nt8.37□□□□□ -1.07
LCP5P40079 MDL2YPL270W 2322 nt8.37□□□□□ -1.07
LCP5P40079 PDC6YGR087C 1692 nt8.37□□□□□ -1.07
LCP5P40079 MRN1YPL184C 1839 nt8.36□□□□□ -1.07
LCP5P40079 ESBP6YNL125C 2022 nt8.36□□□□□ -1.07
LCP5P40079 TGA1tA(UGC)A 73 nt8.36□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms