Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Upk2P38575 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Upk2P38575 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.04■□□□□ 0.96
Upk2P38575 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk2P38575 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Upk2P38575 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Upk2P38575 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk2P38575 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.03■□□□□ 0.96
Upk2P38575 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk2P38575 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Upk2P38575 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk2P38575 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Upk2P38575 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Upk2P38575 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upk2P38575 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Upk2P38575 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Upk2P38575 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk2P38575 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk2P38575 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Upk2P38575 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Upk2P38575 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Upk2P38575 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk2P38575 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Upk2P38575 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk2P38575 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Upk2P38575 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk2P38575 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.96■□□□□ 0.95
Upk2P38575 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk2P38575 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk2P38575 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk2P38575 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Upk2P38575 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Upk2P38575 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk2P38575 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Upk2P38575 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Upk2P38575 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk2P38575 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Upk2P38575 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upk2P38575 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk2P38575 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk2P38575 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Upk2P38575 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk2P38575 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk2P38575 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk2P38575 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Upk2P38575 Gm30023-201ENSMUST00000197970 889 ntBASIC20.91■□□□□ 0.94
Upk2P38575 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Upk2P38575 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk2P38575 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Upk2P38575 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Upk2P38575 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.9■□□□□ 0.94
Upk2P38575 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Upk2P38575 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Upk2P38575 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.89■□□□□ 0.93
Upk2P38575 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.89■□□□□ 0.93
Upk2P38575 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Upk2P38575 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Upk2P38575 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Upk2P38575 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Upk2P38575 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Upk2P38575 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Upk2P38575 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Upk2P38575 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Upk2P38575 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.87■□□□□ 0.93
Upk2P38575 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Upk2P38575 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk2P38575 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Upk2P38575 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk2P38575 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Upk2P38575 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.83■□□□□ 0.93
Upk2P38575 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Upk2P38575 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Upk2P38575 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Upk2P38575 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk2P38575 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk2P38575 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk2P38575 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.82■□□□□ 0.92
Upk2P38575 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk2P38575 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.82■□□□□ 0.92
Upk2P38575 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk2P38575 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Upk2P38575 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk2P38575 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk2P38575 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Upk2P38575 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk2P38575 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.81■□□□□ 0.92
Upk2P38575 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.81■□□□□ 0.92
Upk2P38575 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk2P38575 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk2P38575 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk2P38575 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Upk2P38575 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Upk2P38575 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk2P38575 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Upk2P38575 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.78■□□□□ 0.92
Upk2P38575 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upk2P38575 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Upk2P38575 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk2P38575 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk2P38575 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms