Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Slc6a13P31649 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Slc6a13P31649 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Slc6a13P31649 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Slc6a13P31649 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Slc6a13P31649 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.48■■□□□ 1.51
Slc6a13P31649 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Slc6a13P31649 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Slc6a13P31649 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Slc6a13P31649 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Slc6a13P31649 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Slc6a13P31649 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Slc6a13P31649 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Slc6a13P31649 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Slc6a13P31649 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc6a13P31649 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Slc6a13P31649 Gm30023-201ENSMUST00000197970 889 ntBASIC24.44■■□□□ 1.5
Slc6a13P31649 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Slc6a13P31649 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.44■■□□□ 1.5
Slc6a13P31649 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc6a13P31649 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc6a13P31649 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Slc6a13P31649 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Slc6a13P31649 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.42■■□□□ 1.5
Slc6a13P31649 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Slc6a13P31649 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc6a13P31649 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.4■■□□□ 1.5
Slc6a13P31649 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.4■■□□□ 1.5
Slc6a13P31649 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a13P31649 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a13P31649 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a13P31649 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a13P31649 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Slc6a13P31649 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc6a13P31649 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc6a13P31649 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.37■■□□□ 1.49
Slc6a13P31649 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Slc6a13P31649 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
Slc6a13P31649 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.37■■□□□ 1.49
Slc6a13P31649 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Slc6a13P31649 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Slc6a13P31649 Nkain2-201ENSMUST00000092602 558 ntBASIC24.35■■□□□ 1.49
Slc6a13P31649 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Slc6a13P31649 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Slc6a13P31649 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Slc6a13P31649 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.34■■□□□ 1.49
Slc6a13P31649 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Slc6a13P31649 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
Slc6a13P31649 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.32■■□□□ 1.48
Slc6a13P31649 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a13P31649 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a13P31649 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Slc6a13P31649 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a13P31649 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a13P31649 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a13P31649 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Slc6a13P31649 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a13P31649 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.29■■□□□ 1.48
Slc6a13P31649 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Slc6a13P31649 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Slc6a13P31649 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
Slc6a13P31649 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Slc6a13P31649 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Slc6a13P31649 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a13P31649 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Slc6a13P31649 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Slc6a13P31649 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Slc6a13P31649 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Slc6a13P31649 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Slc6a13P31649 Gm6821-201ENSMUST00000107540 542 ntBASIC24.24■■□□□ 1.47
Slc6a13P31649 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Slc6a13P31649 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.24■■□□□ 1.47
Slc6a13P31649 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Slc6a13P31649 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Slc6a13P31649 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.23■■□□□ 1.47
Slc6a13P31649 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.23■■□□□ 1.47
Slc6a13P31649 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Slc6a13P31649 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Slc6a13P31649 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Slc6a13P31649 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.2■■□□□ 1.47
Slc6a13P31649 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Slc6a13P31649 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a13P31649 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a13P31649 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Slc6a13P31649 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.18■■□□□ 1.46
Slc6a13P31649 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.17■■□□□ 1.46
Slc6a13P31649 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Slc6a13P31649 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Slc6a13P31649 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a13P31649 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.15■■□□□ 1.46
Slc6a13P31649 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Slc6a13P31649 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Slc6a13P31649 Gm8503-201ENSMUST00000118131 455 ntBASIC24.14■■□□□ 1.45
Slc6a13P31649 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Slc6a13P31649 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.13■■□□□ 1.45
Slc6a13P31649 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Slc6a13P31649 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Slc6a13P31649 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Slc6a13P31649 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.12■■□□□ 1.45
Slc6a13P31649 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms