Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Nkain2-201ENSMUST00000092602 558 ntBASIC21.78■■□□□ 1.08
Cd40lgP27548 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.78■■□□□ 1.08
Cd40lgP27548 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cd40lgP27548 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cd40lgP27548 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cd40lgP27548 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cd40lgP27548 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cd40lgP27548 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cd40lgP27548 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cd40lgP27548 Gm8503-201ENSMUST00000118131 455 ntBASIC21.74■■□□□ 1.07
Cd40lgP27548 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cd40lgP27548 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Cd40lgP27548 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cd40lgP27548 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cd40lgP27548 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.72■■□□□ 1.07
Cd40lgP27548 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cd40lgP27548 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cd40lgP27548 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cd40lgP27548 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cd40lgP27548 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cd40lgP27548 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.71■■□□□ 1.07
Cd40lgP27548 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Cd40lgP27548 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cd40lgP27548 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Cd40lgP27548 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd40lgP27548 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.69■■□□□ 1.06
Cd40lgP27548 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd40lgP27548 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd40lgP27548 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.68■■□□□ 1.06
Cd40lgP27548 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd40lgP27548 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cd40lgP27548 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cd40lgP27548 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd40lgP27548 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd40lgP27548 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd40lgP27548 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.67■■□□□ 1.06
Cd40lgP27548 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Cd40lgP27548 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.67■■□□□ 1.06
Cd40lgP27548 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd40lgP27548 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.66■■□□□ 1.06
Cd40lgP27548 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cd40lgP27548 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cd40lgP27548 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cd40lgP27548 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Cd40lgP27548 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cd40lgP27548 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cd40lgP27548 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cd40lgP27548 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cd40lgP27548 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Cd40lgP27548 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cd40lgP27548 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cd40lgP27548 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cd40lgP27548 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40lgP27548 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40lgP27548 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.61■■□□□ 1.05
Cd40lgP27548 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cd40lgP27548 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40lgP27548 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40lgP27548 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40lgP27548 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cd40lgP27548 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40lgP27548 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd40lgP27548 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cd40lgP27548 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cd40lgP27548 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.6■■□□□ 1.05
Cd40lgP27548 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cd40lgP27548 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cd40lgP27548 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.6■■□□□ 1.05
Cd40lgP27548 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd40lgP27548 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.59■■□□□ 1.05
Cd40lgP27548 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.59■■□□□ 1.05
Cd40lgP27548 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd40lgP27548 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.58■■□□□ 1.05
Cd40lgP27548 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Cd40lgP27548 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.58■■□□□ 1.05
Cd40lgP27548 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.58■■□□□ 1.05
Cd40lgP27548 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cd40lgP27548 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cd40lgP27548 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Cd40lgP27548 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cd40lgP27548 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cd40lgP27548 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
Cd40lgP27548 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.56■■□□□ 1.04
Cd40lgP27548 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cd40lgP27548 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cd40lgP27548 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.55■■□□□ 1.04
Cd40lgP27548 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cd40lgP27548 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cd40lgP27548 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cd40lgP27548 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Cd40lgP27548 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cd40lgP27548 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cd40lgP27548 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cd40lgP27548 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.53■■□□□ 1.04
Cd40lgP27548 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd40lgP27548 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd40lgP27548 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cd40lgP27548 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cd40lgP27548 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.52■■□□□ 1.04
Cd40lgP27548 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms