Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cbx3P23198 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cbx3P23198 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cbx3P23198 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Cbx3P23198 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cbx3P23198 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cbx3P23198 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cbx3P23198 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cbx3P23198 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cbx3P23198 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cbx3P23198 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cbx3P23198 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cbx3P23198 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cbx3P23198 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cbx3P23198 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cbx3P23198 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cbx3P23198 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cbx3P23198 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.48■■□□□ 1.03
Cbx3P23198 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cbx3P23198 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cbx3P23198 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Cbx3P23198 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cbx3P23198 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cbx3P23198 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cbx3P23198 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cbx3P23198 Mipep-204ENSMUST00000225043 1548 ntBASIC21.44■■□□□ 1.02
Cbx3P23198 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cbx3P23198 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cbx3P23198 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cbx3P23198 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Cbx3P23198 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cbx3P23198 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cbx3P23198 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cbx3P23198 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.42■■□□□ 1.02
Cbx3P23198 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cbx3P23198 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cbx3P23198 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cbx3P23198 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cbx3P23198 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cbx3P23198 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cbx3P23198 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cbx3P23198 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cbx3P23198 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cbx3P23198 Notumos-201ENSMUST00000151998 2659 ntBASIC21.4■■□□□ 1.02
Cbx3P23198 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.39■■□□□ 1.01
Cbx3P23198 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Cbx3P23198 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cbx3P23198 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cbx3P23198 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cbx3P23198 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.37■■□□□ 1.01
Cbx3P23198 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cbx3P23198 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cbx3P23198 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cbx3P23198 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cbx3P23198 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cbx3P23198 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cbx3P23198 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cbx3P23198 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cbx3P23198 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cbx3P23198 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cbx3P23198 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cbx3P23198 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.35■■□□□ 1.01
Cbx3P23198 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cbx3P23198 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cbx3P23198 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cbx3P23198 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cbx3P23198 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cbx3P23198 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cbx3P23198 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cbx3P23198 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cbx3P23198 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cbx3P23198 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Cbx3P23198 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.32■■□□□ 1
Cbx3P23198 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Cbx3P23198 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cbx3P23198 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cbx3P23198 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cbx3P23198 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.31■■□□□ 1
Cbx3P23198 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.31■■□□□ 1
Cbx3P23198 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cbx3P23198 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cbx3P23198 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cbx3P23198 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cbx3P23198 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.29■■□□□ 1
Cbx3P23198 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cbx3P23198 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cbx3P23198 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cbx3P23198 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.28■■□□□ 1
Cbx3P23198 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.27■■□□□ 1
Cbx3P23198 Gm27322-201ENSMUST00000184007 104 ntBASIC21.26■□□□□ 0.99
Cbx3P23198 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.26■□□□□ 0.99
Cbx3P23198 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cbx3P23198 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cbx3P23198 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cbx3P23198 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cbx3P23198 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cbx3P23198 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Cbx3P23198 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cbx3P23198 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cbx3P23198 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms